Structure-directing sulfur • • •metal noncovalent semicoordination bonding

被引:16
作者
Ananyev, Ivan, V [1 ,2 ]
Bokach, Nadezhda A. [3 ]
Kukushkin, Vadim Yu [3 ,4 ]
机构
[1] RAS, Lab Xray Struct Studies, Inst Organoelement Cpds INEOS, Vavilova Str 28, Moscow 119991, Russia
[2] Natl Res Univ Higher Sch Econ, Dept Chem, Vavilova Str 7, Moscow 101000, Russia
[3] St Petersburg State Univ, Inst Chem, Univ Skaya Nab 7-9, St Petersburg, Russia
[4] South Ural State Univ, 76 Lenin Av, Chelyabinsk 454080, Russia
基金
俄罗斯科学基金会;
关键词
noncovalent interactions; semi-coordination; chalcogen bond; CSD; real-space methods; charge transfer; CORRELATED MOLECULAR CALCULATIONS; GAUSSIAN-BASIS SETS; ELECTRON-DENSITY; CRYSTAL-STRUCTURE; ENERGY DENSITY; COMPLEXES; ATOMS; COORDINATION; DEFINITION; TERMS;
D O I
10.1107/S2052520620005685
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The abundance and geometric features of nonbonding contacts between metal centers and `soft' sulfur atoms bound to a non-metal substituent R were analyzed by processing data from the Cambridge Structural Database. The angular arrangement of M, S and R atoms with angle(R-S center dot center dot center dot M) down to 150 degrees was a common feature of the late transition metal complexes exhibiting shortened R-S center dot center dot center dot M contacts. Several model nickel(II), palladium(II), platinum(II) and gold(I) complexes were chosen for a theoretical analysis of R-S center dot center dot center dot M interactions using the DFT method applied to (equilibrium) isolated systems. A combination of the real-space approaches, such as Quantum Theory of Atoms in Molecules (QTAIM), noncovalent interaction index (NCI), electron localization function (ELF) and Interacting Quantum Atoms (IQA), and orbital (Natural Bond Orbitals, NBO) methods was used to provide insights into the nature and energetics of R-S center dot center dot center dot M interactions with respect to the metal atom identity and its coordination environment. The explored features of the R-S center dot center dot center dot M interactions support the trends observed by inspecting the CSD statistics, and indicate a predominant contribution of semicoordination bonds between nucleophilic sites of the sulfur atom and electrophilic sites of the metal. A contribution of chalcogen bonding (that is formally opposite to semicoordination) was also recognized, although it was significantly smaller in magnitude. The analysis of R-S center dot center dot center dot M interaction strengths was performed and the structure-directing role of the intramolecular R-S center dot center dot center dot M interactions in stabilizing certain conformations of metal complexes was revealed.
引用
收藏
页码:436 / 449
页数:14
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