Characterization of the aurantimycin biosynthetic gene cluster and enhancing its production by manipulating two pathway-specific activators in Streptomyces aurantiacus JA 4570

被引:19
作者
Zhao, Houyuan [1 ]
Wang, Liang [1 ]
Wan, Dan [1 ]
Qi, Jianzhao [1 ]
Gong, Rong [1 ]
Deng, Zixin [1 ,2 ]
Chen, Wenqing [1 ]
机构
[1] Wuhan Univ, Sch Pharmaceut Sci, Minist Educ, Key Lab Combinatorial Biosynthesis & Drug Discove, Wuhan 430071, Peoples R China
[2] Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, State Key Lab Microbial Metab, Shanghai 200030, Peoples R China
基金
美国国家科学基金会;
关键词
Aurantimycin; Gene cluster; Pathway-specific activators; Streptomyces; Biosynthesis; PHYSICOCHEMICAL PROPERTIES; DEPSIPEPTIDE ANTIBIOTICS; STRUCTURE ELUCIDATION; PIPERAZIC ACID; POLYKETIDE; APOPTOSIS; FERMENTATION; TAXONOMY; DNA; POLYOXYPEPTIN;
D O I
10.1186/s12934-016-0559-7
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: Aurantimycin (ATM), produced by Streptomyces aurantiacus JA 4570, is a potent antimicrobial and antitumor antibiotic. Although the chemical structure of ATM is highly distinctive and features a cyclohexadepsipeptide scaffold attached with a C-14 acyl side chain, little is known about its biosynthetic pathway and regulatory mechanism. Results: In this work, we report the identification and characterization of the ATM biosynthetic gene cluster from S. aurantiacus JA 4570. Targeted inactivation of artG, coding for a NRPS enzyme, completely abolished ATM production, thereof demonstrating the target gene cluster (art) is responsible for ATM biosynthesis. Moreover, four NRPS adenylation (A) domains including a freestanding enzyme ArtC have been characterized in vitro, whose substrate specificities are consistent with in silico analysis. Further genetic analysis of the two regulatory genes artB and artX unambiguously suggested both of them play positive roles in ATM biosynthesis, and ATM-A production was thus rationally enhanced to about 2.5 fold via tandem overexpression of artB and artX in S. aurantiacus JA 4570. Conclusions: These results will provide the basis for the understanding of precise mechanisms for ATM biosynthesis, and open the way for both rational construction of high-production ATM producer and orient-directed generation of designer ATM derivatives via synthetic biology strategies.
引用
收藏
页数:12
相关论文
共 44 条
[31]   Piperazic acid-containing natural products: Isolation, biological relevance and total synthesis [J].
Oelke, Alexander J. ;
France, David J. ;
Hofmann, Tatjana ;
Wuitschik, Georg ;
Ley, Steven V. .
NATURAL PRODUCT REPORTS, 2011, 28 (08) :1445-1471
[32]   GE3, a novel hexadepsipeptide antitumor antibiotic, produced by Streptomyces sp. .1. Taxonomy, production, isolation, physico-chemical properties, and biological activities [J].
Sakai, Y ;
Yoshida, T ;
Tsujita, T ;
Ochiai, K ;
Agatsuma, T ;
Saitoh, Y ;
Tanaka, F ;
Akiyama, T ;
Akinaga, S ;
Mizukami, T .
JOURNAL OF ANTIBIOTICS, 1997, 50 (08) :659-664
[33]   SWISS-MODEL: an automated protein homology-modeling server [J].
Schwede, T ;
Kopp, J ;
Guex, N ;
Peitsch, MC .
NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3381-3385
[34]   The type I fatty acid and polyketide synthases: a tale of two megasynthases [J].
Smith, Stuart ;
Tsai, Shiou-Chuan .
NATURAL PRODUCT REPORTS, 2007, 24 (05) :1041-1072
[35]   A83586C, A NEW DEPSIPEPTIDE ANTIBIOTIC [J].
SMITKA, TA ;
DEETER, JB ;
HUNT, AH ;
MERTZ, FP ;
ELLIS, RM ;
BOECK, LD ;
YAO, RC .
JOURNAL OF ANTIBIOTICS, 1988, 41 (06) :726-733
[36]   The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases [J].
Stachelhaus, T ;
Mootz, HD ;
Marahiel, MA .
CHEMISTRY & BIOLOGY, 1999, 6 (08) :493-505
[37]  
Thompson Julie D, 2002, Curr Protoc Bioinformatics, VChapter 2, DOI 10.1002/0471250953.bi0203s00
[38]   ANTIINFLAMMATORY EFFECTS AND SPECIFICITY OF L-156,602 - COMPARISON OF EFFECTS ON CONCANAVALIN-A AND ZYMOSAN-INDUCED FOOTPAD EDEMA, AND CONTACT SENSITIVITY RESPONSE [J].
TSUJI, RF ;
YAMAKOSHI, J ;
URAMOTO, M ;
KOSHINO, H ;
SAITO, M ;
KIKUCHI, M ;
MASUDA, T .
IMMUNOPHARMACOLOGY, 1995, 29 (01) :79-87
[39]  
Uchihata Y, 2002, J ANTIBIOT, V55, P1
[40]   IC101, EXTRACELLULAR-MATRIX ANTAGONIST PRODUCED BY STREPTOMYCES SP MJ202-72F3 - PRODUCTION, ISOLATION, STRUCTURE DETERMINATION AND BIOLOGICAL-ACTIVITY [J].
UENO, M ;
AMEMIYA, M ;
SOMENO, T ;
MASUDA, T ;
IINUMA, H ;
NAGANAWA, H ;
HAMADA, M ;
ISHIZUKA, M ;
TAKEUCHI, T .
JOURNAL OF ANTIBIOTICS, 1993, 46 (11) :1658-1665