Structural Basis of DEAH/RHA Helicase Activity

被引:5
作者
Chen, Michael C. [1 ,2 ]
Ferre-D'Amare, Adrian R. [1 ]
机构
[1] NHLBI, Biochem & Biophys Ctr, Bldg 10, Bethesda, MD 20892 USA
[2] Univ Cambridge, Dept Chem, Cambridge CB2, England
来源
CRYSTALS | 2017年 / 7卷 / 08期
关键词
DEAH/RHA; DExH; helicase; MLE; Prp43p; DHX36; HCV NS3; VIRUS NS3 HELICASE; DEAD-BOX PROTEINS; MOLECULE IMAGING REVEALS; G-PATCH PROTEIN; RNA HELICASES; G-QUADRUPLEXES; CRYSTAL-STRUCTURE; ATP HYDROLYSIS; TRANSLOCATION; MECHANISM;
D O I
10.3390/cryst7080253
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
DEAH/RHA helicases are members of a large group of proteins collectively termed DExH-box, which also include Ski2-like and NS3/NPH-II helicases. By binding and remodeling DNA and RNA, DEAH/RHA helicases play critical roles in many cellular processes ranging from transcription and splicing to ribosome biogenesis, innate immunity and stress granule formation. While numerous crystal structures of other DExH-box proteins helicases have been reported, no structures of DEAH/RHA helicases bound to nucleic acid substrates have been available until the recent co-crystal structures of the maleless (MLE) and Prp43p bound to RNA. This review examines how these new structures provide a starting point to understand how DEAH/RHA helicases bind to, translocate on, and unwind nucleic acid substrates.
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页数:13
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共 62 条
  • [31] The ATPase and helicase activities of Prp43p are stimulated by the G-patch protein Pfa1p during yeast ribosome biogenesis
    Lebaron, Simon
    Papin, Christophe
    Capeyrou, Regine
    Chen, Yan-Ling
    Froment, Carine
    Monsarrat, Bernard
    Caizergues-Ferrer, Michele
    Grigoriev, Mikhail
    Henry, Yves
    [J]. EMBO JOURNAL, 2009, 28 (24) : 3808 - 3819
  • [32] Single-molecule imaging reveals the translocation and DNA looping dynamics of hepatitis C virus NS3 helicase
    Lin, Chang-Ting
    Tritschler, Felix
    Lee, Kyung Suk
    Gu, Meigang
    Rice, Charles M.
    Ha, Taekjip
    [J]. PROTEIN SCIENCE, 2017, 26 (07) : 1391 - 1403
  • [33] Dead-box proteins: a family affair - active and passive players in RNP-remodeling
    Linder, Patrick
    [J]. NUCLEIC ACIDS RESEARCH, 2006, 34 (15) : 4168 - 4180
  • [34] From unwinding to clamping - the DEAD box RNA helicase family
    Linder, Patrick
    Jankowsky, Eckhard
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2011, 12 (08) : 505 - 516
  • [35] ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwinding
    Liu, Fei
    Putnam, Andrea
    Jankowsky, Eckhard
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (51) : 20209 - 20214
  • [36] Insights into RNA unwinding and ATP hydrolysis by the flavivirus NS3 protein
    Luo, Dahai
    Xu, Ting
    Watson, Randall P.
    Scherer-Becker, Daniella
    Sampath, Aruna
    Jahnke, Wolfgang
    Yeong, Sui Sum
    Wang, Chern Hoe
    Lim, Siew Pheng
    Strongin, Alex
    Vasudevan, Subhash G.
    Lescar, Julien
    [J]. EMBO JOURNAL, 2008, 27 (23) : 3209 - 3219
  • [37] Molecular insights into RNA and DNA helicase evolution from the determinants of specificity for a DEAD-box RNA helicase
    Mallam, Anna L.
    Sidote, David J.
    Lambowitz, Alan M.
    [J]. ELIFE, 2014, 3 : e04630
  • [38] DExD/H-box RNA helicases in ribosome biogenesis
    Martin, Roman
    Straub, Annika U.
    Doebele, Carmen
    Bohnsack, Markus T.
    [J]. RNA BIOLOGY, 2013, 10 (01) : 4 - 18
  • [39] Binding of G-quadruplexes to the N-terminal Recognition Domain of the RNA Helicase Associated with AU-rich Element (RHAU)
    Meier, Markus
    Patel, Trushar R.
    Booy, Evan P.
    Marushchak, Oksana
    Okun, Natalie
    Deo, Soumya
    Howard, Ryan
    McEleney, Kevin
    Harding, Stephen E.
    Stetefeld, Joerg
    McKenna, Sean A.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (49) : 35014 - 35027
  • [40] Existence and consequences of G-quadruplex structures in DNA
    Murat, Pierre
    Balasubramanian, Shankar
    [J]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 2014, 25 : 22 - 29