The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists

被引:1850
作者
Huang, Da Wei [1 ]
Sherman, Brad T. [1 ]
Tan, Qina [1 ]
Collins, Jack R.
Alvord, W. Gregory [2 ]
Roayaei, Jean [2 ]
Stephens, Robert
Baseler, Michael W. [1 ]
Lane, H. Clifford [3 ]
Lempicki, Richard A. [1 ]
机构
[1] NCI, Lab Immunopathogenesis & Bioinformat, Clin Serv Program, SAIC Frederick Inc, Frederick, MD 21702 USA
[2] NCI, Comp Stat Serv, Data Management Serv, Frederick, MD 21702 USA
[3] NIH, NIAID, Immunoregulat Lab, Bethesda, MD 20892 USA
关键词
D O I
10.1186/gb-2007-8-9-r183
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The DAVID Gene Functional Classification Tool http://david.abcc.ncifcrf.gov uses a novel agglomeration algorithm to condense a list of genes or associated biological terms into organized classes of related genes or biology, called biological modules. This organization is accomplished by mining the complex biological co-occurrences found in multiple sources of functional annotation. It is a powerful method to group functionally related genes and terms into a manageable number of biological modules for efficient interpretation of gene lists in a network context.
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页数:16
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