Otosclerosis Associated with a De Novo Mutation-832G > A in the TGFB1 Gene Promoter Causing a Decreased Expression Level

被引:7
作者
Priyadarshi, Saurabh [1 ]
Hansdah, Kirtal [1 ]
Ray, Chinmay Sundar [2 ]
Biswal, Narayan Chandra [2 ]
Ramchander, Puppala Venkat [1 ]
机构
[1] Inst Life Sci, Nalco Sq, Bhubaneswar, Orissa, India
[2] Shrirama Chandra Bhanj SCB Med Coll, Dept Ear Nose & Throat ENT, Cuttack, Orissa, India
关键词
RARE; VARIANTS; OSTEOPROTEGERIN; REGION;
D O I
10.1038/srep29572
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Otosclerosis (OTSC) is defined by abnormal bone remodeling in the otic capsule of middle ear which leads to conductive hearing loss. In our previous study, we have identified a de novo heterozygous mutation -832G > A in the promoter of TGFB1 in an otosclerosis patient. In the present study, we progressively screened this mutation in a cohort of 254 cases and 262 controls. The family members of the patient positive for -832G > A variation were also screened and found inheritance of this variation only to her daughter. Interestingly, this variation is associated with a decreased level of the TGFB1 transcript in the patient compared to her parents and controls. In silico analysis of this mutation predicted the altered binding of two transcription factors v-Myb and MZF1 in the mutated promoter sequence. Further, functional analysis of this mutation using in vitro luciferase and electrophoretic mobility shift assays revealed that this variation is associated with decreased gene expression. In conclusion, this study established the fact that TGFB1 mutation -832G > A altered the TGFB1 promoter activity, which could affect the susceptibility to otosclerosis development. Further, systemic analysis of TGFB1 gene sequence and expression analysis of this gene might reveal its precise role in the pathogenesis of otosclerosis.
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页数:6
相关论文
共 19 条
[11]   A RAPID NONENZYMATIC METHOD FOR THE PREPARATION OF HMW DNA FROM BLOOD FOR RFLP STUDIES [J].
LAHIRI, DK ;
NURNBERGER, JI .
NUCLEIC ACIDS RESEARCH, 1991, 19 (19) :5444-5444
[12]   Rare and low-frequency variants in human common diseases and other complex traits [J].
Lettre, Guillaume .
JOURNAL OF MEDICAL GENETICS, 2014, 51 (11) :705-714
[13]   Genetic Association and Altered Gene Expression of Osteoprotegerin in Otosclerosis Patients [J].
Priyadarshi, Saurabh ;
Ray, Chinmay Sundar ;
Biswal, Narayan Chandra ;
Nayak, Soumya Ranjan ;
Panda, Khirod Chandra ;
Desai, Ashim ;
Ramchander, Puppala Venkat .
ANNALS OF HUMAN GENETICS, 2015, 79 (04) :225-237
[14]   Genetic Association and Gene Expression Profiles of TGFB1 and the Contribution of TGFB1 to Otosclerosis Susceptibility [J].
Priyadarshi, Saurabh ;
Ray, Chinmay Sundar ;
Panda, Khirod Chandra ;
Desai, Ashim ;
Nayak, Soumya Ranjan ;
Biswal, Narayan Chandra ;
Ramchander, Puppala Venkat .
JOURNAL OF BONE AND MINERAL RESEARCH, 2013, 28 (12) :2490-2497
[15]  
Schrauwen I, 2008, J BONE MINER RES, V23, P507, DOI [10.1359/jbmr.071112, 10.1359/JBMR.071112]
[16]   Allelic diversity in the TGFB1 regulatory region:: characterization of novel functional single nucleotide polymorphisms [J].
Shah, R ;
Rahaman, B ;
Hurley, CK ;
Posch, PE .
HUMAN GENETICS, 2006, 119 (1-2) :61-74
[17]   Detection of Rare Nonsynonymous Variants in TGFB1 in Otosclerosis Patients [J].
Thys, M. ;
Schrauwen, I. ;
Vanderstraeten, K. ;
Dieltjens, N. ;
Fransen, E. ;
Ealy, M. ;
Cremers, C. W. R. J. ;
van de Heyning, P. ;
Vincent, R. ;
Offeciers, E. ;
Smith, R. H. ;
van Camp, G. .
ANNALS OF HUMAN GENETICS, 2009, 73 :171-175
[18]   The coding polymorphism T263I in TGF-β1 is associated with otosclerosis in two independent populations [J].
Thys, Melissa ;
Schrauwen, Isabelle ;
Vanderstraeten, Kathleen ;
Janssens, Katrien ;
Dieltjens, Nele ;
Van Den Bogaert, Kris ;
Fransen, Erik ;
Chen, Wenjie ;
Ealy, Megan ;
Claustres, Mireille ;
Cremers, Cor R. W. J. ;
Dhooge, Ingeborg ;
Declau, Frank ;
Claes, Jos ;
Van de Heyning, Paul ;
Vincent, Robert ;
Somers, Thomas ;
Offeciers, Erwin ;
Smith, Richard J. H. ;
Van Camp, Guy .
HUMAN MOLECULAR GENETICS, 2007, 16 (17) :2021-2030
[19]   MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia [J].
Vargova, Karin ;
Curik, Nikola ;
Burda, Pavel ;
Basova, Petra ;
Kulvait, Vojtech ;
Pospisil, Vit ;
Savvulidi, Filipp ;
Kokavec, Juraj ;
Necas, Emanuel ;
Berkova, Adela ;
Obrtlikova, Petra ;
Karban, Josef ;
Mraz, Marek ;
Pospisilova, Sarka ;
Mayer, Jiri ;
Trneny, Marek ;
Zavadil, Jiri ;
Stopka, Tomas .
BLOOD, 2011, 117 (14) :3816-3825