Fast Magic-Angle Spinning 19F NMR Spectroscopy of HIV-1 Capsid Protein Assemblies

被引:52
作者
Wang, Mingzhang [1 ,2 ]
Lu, Manman [1 ,2 ,3 ]
Fritz, Matthew P. [1 ,2 ]
Quinn, Caitlin M. [1 ]
Byeon, In-Ja L. [2 ,3 ]
Byeon, Chang-Hyeock [2 ,3 ]
Struppe, Jochem [4 ]
Maas, Werner [4 ]
Gronenborn, Angela M. [2 ,3 ]
Polenova, Tatyana [1 ,2 ]
机构
[1] Univ Delaware, Brown Labs, Dept Chem & Biochem, Newark, DE 19716 USA
[2] Univ Pittsburgh, Pittsburgh Ctr HIV Prot Interact, Sch Med, 1051 Biomed Sci Tower 3,3501 Fifth Ave, Pittsburgh, PA 15261 USA
[3] Univ Pittsburgh, Sch Med, Dept Struct Biol, 1051 Biomed Sci Tower 3,3501 Fifth Ave, Pittsburgh, PA 15261 USA
[4] Bruker Biospin Corp, 15 Fortune Dr, Billerica, MA USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
capsids; F-19 NMR spectroscopy; magic angle spinning; protein assemblies; protein structures; STATE; SITE; DRIVEN;
D O I
10.1002/anie.201809060
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
F-19 NMR spectroscopy is an attractive and growing area of research with broad applications in biochemistry, chemical biology, medicinal chemistry, and materials science. We have explored fast magic angle spinning (MAS) F-19 solid-state NMR spectroscopy in assemblies of HIV-1 capsid protein. Tryptophan residues with fluorine substitution at the 5-position of the indole ring were used as the reporters. The F-19 chemical shifts for the five tryptophan residues are distinct, reflecting differences in their local environment. Spin-diffusion and radio-frequency-driven-recoupling experiments were performed at MAS frequencies of 35 kHz and 40-60 kHz, respectively. Fast MAS frequencies of 40-60 kHz are essential for consistently establishing F-19-F-19 correlations, yielding interatomic distances of the order of 20 angstrom. Our results demonstrate the potential of fast MAS F-19 NMR spectroscopy for structural analysis in large biological assemblies.
引用
收藏
页码:16375 / 16379
页数:5
相关论文
共 43 条
[1]  
[Anonymous], 2016, ANGEW CHEM, V128, P9050
[2]   Pharmaceutical Applications of Relaxation Filter-Selective Signal Excitation Methods for 19F Solid-State Nuclear Magnetic Resonance: Case Study With Atorvastatin in Dosage Formulation [J].
Asada, Mamiko Nasu ;
Nemoto, Takayuki ;
Mimura, Hisashi .
JOURNAL OF PHARMACEUTICAL SCIENCES, 2016, 105 (03) :1233-1238
[3]   High-resolution 1H MAS RFDR NMR of biological membranes [J].
Aucoin, Darryl ;
Camenares, Devin ;
Zhao, Xin ;
Jung, Jay ;
Sato, Takeshi ;
Smith, Steven O. .
JOURNAL OF MAGNETIC RESONANCE, 2009, 197 (01) :77-86
[4]   Site-Specific Structural Variations Accompanying Tubular Assembly of the HIV-1 Capsid Protein [J].
Bayro, Marvin J. ;
Chen, Bo ;
Yau, Wai-Ming ;
Tycko, Robert .
JOURNAL OF MOLECULAR BIOLOGY, 2014, 426 (05) :1109-1127
[5]   Homonuclear radio frequency-driven recoupling in rotating solids [J].
Bennett, AE ;
Rienstra, CM ;
Griffiths, JM ;
Zhen, WG ;
Lansbury, PT ;
Griffin, RG .
JOURNAL OF CHEMICAL PHYSICS, 1998, 108 (22) :9463-9479
[6]   ON THE INTERACTION OF NUCLEAR SPINS IN A CRYSTALLINE LATTICE [J].
BLOEMBERGEN, N .
PHYSICA, 1949, 15 (3-4) :386-426
[7]   Motions on the Millisecond Time Scale and Multiple Conformations of HIV-1 Capsid Protein: Implications for Structural Polymorphism of CA Assemblies [J].
Byeon, In-Ja L. ;
Hou, Guangjin ;
Han, Yun ;
Suiter, Christopher L. ;
Ahn, Jinwoo ;
Jung, Jinwon ;
Byeon, Chang-Hyeock ;
Gronenborn, Angela M. ;
Polenova, Tatyana .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (14) :6455-6466
[8]   Placement of 19F into the center of GB1:: effects on structure and stability [J].
Campos-Olivas, R ;
Aziz, R ;
Helms, GL ;
Evans, JNS ;
Gronenborn, AM .
FEBS LETTERS, 2002, 517 (1-3) :55-60
[9]   Atomic Resolution Structure of Monomorphic Aβ42 Amyloid Fibrils [J].
Colvin, Michael T. ;
Silvers, Robert ;
Ni, Qing Zhe ;
Can, Thach V. ;
Sergeyev, Ivan ;
Rosay, Melanie ;
Donovan, Kevin J. ;
Michael, Brian ;
Wall, Joseph ;
Linse, Sara ;
Griffin, Robert G. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (30) :9663-9674
[10]   Simple and inexpensive incorporation of 19F-Tryptophan for protein NMR spectroscopy [J].
Crowley, Peter B. ;
Kyne, Ciara ;
Monteith, William B. .
CHEMICAL COMMUNICATIONS, 2012, 48 (86) :10681-10683