Advances in proteome-wide analysis of plant lysine acetylation

被引:23
|
作者
Xia, Linchao [1 ]
Kong, Xiangge [1 ]
Song, Haifeng [1 ]
Han, Qingquan [1 ]
Zhang, Sheng [1 ]
机构
[1] Sichuan Univ, Coll Life Sci, Key Lab Bioresource & Ecoenvironm, Minist Educ, Chengdu 610065, Peoples R China
基金
中国国家自然科学基金;
关键词
lysine acetylproteomes; modified characteristics; plant growth and development; stress responses; PTM crosstalk; N-TERMINAL ACETYLATION; HISTONE ACETYLATION; FATTY-ACID; NONENZYMATIC ACETYLATION; INNATE IMMUNITY; COENZYME-A; PROTEINS; ACETYLOME; GENE; IDENTIFICATION;
D O I
10.1016/j.xplc.2021.100266
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lysine acetylation (LysAc) is a conserved and important post-translational modification (PTM) that plays a key role in plant physiological and metabolic processes. Based on advances in Lys-acetylated protein immunoenrichment and mass-spectrometric technology, LysAc proteomics studies have been performed in many species. Such studies have made substantial contributions to our understanding of plant LysAc, revealing that Lys-acetylated histones and nonhistones are involved in a broad spectrum of plant cellular processes. Here, we present an extensive overview of recent research on plant Lys-acetylproteomes. We provide in-depth insights into the characteristics of plant LysAc modifications and the mechanisms by which LysAc participates in cellular processes and regulates metabolism and physiology during plant growth and development. First, we summarize the characteristics of LysAc, including the properties of Lys-acetylated sites, the motifs that flank Lys-acetylated lysines, and the dynamic alterations in LysAc among different tissues and developmental stages. We also outline a map of Lys-acetylated proteins in the Calvin-Benson cycle and central carbon metabolism-related pathways. We then introduce some examples of the regulation of plant growth, development, and biotic and abiotic stress responses by LysAc. We discuss the interaction between LysAc and Na-terminal acetylation and the crosstalk between LysAc and other PTMs, including phosphorylation and succinylation. Finally, we propose recommendations for future studies in the field. We conclude that LysAc of proteins plays an important role in the regulation of the plant life cycle.
引用
收藏
页数:20
相关论文
共 50 条
  • [41] Proteome-wide analysis of chaperone-mediated autophagy targeting motifs
    Kirchner, Philipp
    Bourdenx, Mathieu
    Madrigal-Matute, Julio
    Tiano, Simoni
    Diaz, Antonio
    Bartholdy, Boris A.
    Will, Britta
    Cuervo, Ana Maria
    PLOS BIOLOGY, 2019, 17 (05)
  • [42] Proteome-wide analysis of phospho-regulated PDZ domain interactions
    Sundell, Gustav N.
    Arnold, Roland
    Ali, Muhammad
    Naksukpaiboon, Piangfan
    Orts, Julien
    Guentert, Peter
    Chi, Celestine N.
    Ivarsson, Ylva
    MOLECULAR SYSTEMS BIOLOGY, 2018, 14 (08)
  • [43] Proteome-wide discovery of mislocated proteins in cancer
    Lee, KiYoung
    Byun, Kyunghee
    Hong, Wonpyo
    Chuang, Han-Yu
    Pack, Chan-Gi
    Bayarsaikhan, Enkhjargal
    Paek, Sun Ha
    Kim, Hyosil
    Shin, Hye Young
    Ideker, Trey
    Lee, Bonghee
    GENOME RESEARCH, 2013, 23 (08) : 1283 - 1294
  • [44] Recent advances in proteome-wide label-free target deconvolution for bioactive small molecules
    Sun, Jichao
    Prabhu, Nayana
    Tang, Jun
    Yang, Fan
    Jia, Lin
    Guo, Jinan
    Xiao, Kefeng
    Tam, Wai Leong
    Nordlund, Par
    Dai, Lingyun
    MEDICINAL RESEARCH REVIEWS, 2021, 41 (06) : 2893 - 2926
  • [45] "One-Pot" Sample Processing Method for Proteome-Wide Analysis of Microbial Cells and Spores
    Swarge, Bhagyashree Nandakishor
    Roseboom, Winfried
    Zheng, Linli
    Abhyankar, Wishwas R.
    Brul, Stanley
    de Koster, Chris G.
    de Koning, Leo J.
    PROTEOMICS CLINICAL APPLICATIONS, 2018, 12 (05)
  • [46] Proteome-wide Systems Genetics to Identify Functional Regulators of Complex Traits
    Molendijk, Jeffrey
    Parker, Benjamin L.
    CELL SYSTEMS, 2021, 12 (01) : 5 - 22
  • [47] A proteome-wide map of 20(S)-hydroxycholesterol interactors in cell membranes
    Cheng, Yu-Shiuan
    Zhang, Tianyi
    Ma, Xiang
    Pratuangtham, Sarida
    Zhang, Grace C.
    Ondrus, Alexander A.
    Mafi, Amirhossein
    Lomenick, Brett
    Jones, Jeffrey J.
    Ondrus, Alison E.
    NATURE CHEMICAL BIOLOGY, 2021, 17 (12) : 1271 - 1280
  • [48] Global Proteome Analysis Links Lysine Acetylation to Diverse Functions in Oryza Sativa
    Xue, Chao
    Liu, Shuai
    Chen, Chen
    Zhu, Jun
    Yang, Xibin
    Zhou, Yong
    Guo, Rui
    Liu, Xiaoyu
    Gong, Zhiyun
    PROTEOMICS, 2018, 18 (01)
  • [49] Proteome-Wide Analysis of N-Glycosylation Stoichiometry Using SWATH Technology
    Yang, Xiangyun
    Wang, Zhiyuan
    Guo, Lin
    Zhu, Zhengjiang
    Zhang, Yaoyang
    JOURNAL OF PROTEOME RESEARCH, 2017, 16 (10) : 3830 - 3840
  • [50] Proteome-Wide Analysis of Cysteine Reactivity during . Effector-Triggered Immunity
    McConnell, Evan W.
    Berg, Philip
    Westlake, Timothy J.
    Wilson, Katherine M.
    Popescu, George, V
    Hicks, Leslie M.
    Popescu, Sorina C.
    PLANT PHYSIOLOGY, 2019, 179 (04) : 1248 - 1264