Characterization of the complete mitochondrial genome sequence of Charybdis bimaculata and phylogenetic analysis

被引：2

作者：

Liu, Xue ^{[1
,2
,3
,4
]}

Yuan, YiMing ^{[5
,6
]}

He, YanLong ^{[5
,6
]}

Liu, ShouHai ^{[5
,6
]}

Ji, Xiao ^{[5
,6
]}

Qin, YuTao ^{[5
,6
]}

Ma, KeYi ^{[1
,2
,3
,4
]}

机构：

[1] Shanghai Ocean Univ, Natl Demonstrat Ctr Expt Fisheries Sci Educ, Shanghai 201306, Peoples R China

[2] Shanghai Ocean Univ, Key Lab Explorat & Utilizat Aquat Genet Resources, Minist Educ, Shanghai, Peoples R China

[3] Shanghai Ocean Univ, Key Lab Freshwater Aquat Genet Resources, Minist Agr, Shanghai, Peoples R China

[4] Shanghai Ocean Univ, Shanghai Engn Res Ctr Aquaculture, Shanghai, Peoples R China

[5] State Ocean Adm, East China Sea Environm Monitoring Ctr, Shanghai 201206, Peoples R China

[6] SOA, Key Lab Integrated Monitoring & Appl Technol Mari, Shanghai, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

关键词：

Charybdis bimaculata; complete mitochondrial genome; phylogenetic analysis; JAPAN;

D O I：

10.1080/23802359.2018.1524273

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In this study, the complete mitogenome of Charybdis bimaculata was sequenced and annotated. The mitogenome is 15,441 bp in length, containing 37 classical eukaryotic mitochondrial regions (13 typical protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes) and a non-coding control region. Most of the genes are initiated with ATA, ATG, and ATT, though GTG is also used as an initiation codon. Twelve PCGs stop with complete termination codon TAA and TAG, while Cob uses incomplete codon (T-). The phylogenetic relationships based on 13 PCGs show that C. bimaculata clusters closest to C. fariata and C. natator.

引用

页码：1163 / 1164

页数：2

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