Development of PCR-SSOP for HLA-A typing of bone marrow registry donors

被引:36
作者
Williams, F
Mallon, E
Middleton, D
机构
[1] N. Ireland Tissue Typing Laboratory, City Hospital, Belfast
[2] N. Ireland Reg. Tissue Typing Lab., City Hospital
来源
TISSUE ANTIGENS | 1997年 / 49卷 / 01期
关键词
bone marrow registry; HLA-A alleles; homozygosity; sequence-specific oligonucleotide probes;
D O I
10.1111/j.1399-0039.1997.tb02712.x
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
A medium resolution PCR-SSOP typing method, using 26 digoxigenin labelled probes, has been established for the identification of HLA-A alleles. The system is capable of discriminating all of the serologically defined specificities except for eight heterozygous combinations which are however rare in Caucasians. The method has been applied to 1,838 individuals on the local bone marrow registry who either had only one detectable HLA-A antigen, or a HLA-A antigen whose presence had been queried using the serological technique or a broad HLA-A specificity assigned by the serological technique. In all but one case the serologically assigned antigens were detected with the PCR-SSOP method. In addition, PCR-SSOP detected the presence of a second HLA-A allele in over 10% of individuals who had been previously homozygous. Frequency information, based on a population of 5,000 individuals, has been established using a combination of molecular and serological typing data.
引用
收藏
页码:61 / 66
页数:6
相关论文
共 11 条
  • [1] A COMPREHENSIVE POLYMERASE CHAIN-REACTION OLIGONUCLEOTIDE TYPING SYSTEM FOR THE HLA CLASS-I A-LOCUS
    ALLEN, M
    LIU, LM
    GYLLENSTEN, U
    [J]. HUMAN IMMUNOLOGY, 1994, 40 (01) : 25 - 32
  • [2] ARNETT KL, 1995, TISSUE ANTIGENS, V45, P217
  • [3] ARNETT MJH, 1996, TISSUE ANTIGENS, V47, P422
  • [4] LOCUS-SPECIFIC AMPLIFICATION OF HLA CLASS-I GENES FROM GENOMIC DNA - LOCUS-SPECIFIC SEQUENCES IN THE FIRST AND 3RD INTRONS OF HLA-A, HLA-B, AND HLA-C ALLELES
    CEREB, N
    MAYE, P
    LEE, S
    KONG, Y
    YANG, SY
    [J]. TISSUE ANTIGENS, 1995, 45 (01): : 1 - 11
  • [5] CHARACTERIZATION OF THE HLA-A POLYMORPHISM BY LOCUS-SPECIFIC POLYMERASE CHAIN-REACTION AMPLIFICATION AND OLIGONUCLEOTIDE HYBRIDIZATION
    GAO, XJ
    JAKOBSEN, IB
    SERJEANTSON, SW
    [J]. HUMAN IMMUNOLOGY, 1994, 41 (04) : 267 - 279
  • [6] HEYLAND J, 1995, HUM IMMUNOL S1, V44, P126
  • [7] MODIFICATION OF AN HLA-B PCR-SSOP TYPING SYSTEM LEADING TO IMPROVED ALLELE DETERMINATION
    MIDDLETON, D
    WILLIAMS, F
    CULLEN, C
    MALLON, E
    [J]. TISSUE ANTIGENS, 1995, 45 (04): : 232 - 236
  • [8] MIDDLETON D, 1994, ADV ELECTROPHORESIS, V7, P1
  • [9] Miller S. A., 1998, NUCLEIC ACIDS RES, V16, P215, DOI DOI 10.1093/NAR/16.3.1215
  • [10] ISOELECTRIC-FOCUSING SUBTYPES OF HLA-A CAN BE DEFINED BY OLIGONUCLEOTIDE TYPING
    OH, SH
    FLEISCHHAUER, K
    YANG, SY
    [J]. TISSUE ANTIGENS, 1993, 41 (03): : 135 - 142