Prediction of Phospholipid-Water Partition Coefficients of Ionic Organic Chemicals Using the Mechanistic Model COSMOmic

被引:84
作者
Bittermann, Kai [1 ]
Spycher, Simon [2 ,3 ]
Endo, Satoshi [1 ]
Pohler, Larissa [3 ]
Huniar, Uwe [3 ]
Goss, Kai-Uwe [1 ,4 ]
Klamt, Andreas [3 ,5 ]
机构
[1] UFZ Helmholtz Ctr Environm Res, D-04318 Leipzig, Germany
[2] Swiss Fed Res Stn Agroscope, Ecotoxicol Grp, CH-8820 Wadenswil, Switzerland
[3] COSMOl GmbH&COKG, D-51379 Leverkusen, Germany
[4] Univ Halle Wittenberg, Inst Chem, D-06120 Halle, Germany
[5] Univ Regensburg, Dept Phys & Theoret Chem, D-93040 Regensburg, Germany
关键词
MOLECULAR-DYNAMICS SIMULATIONS; LIPOSOMAL MEMBRANE; LIPID-MEMBRANES; ENERGY; APPROXIMATION; ACCUMULATE; BILAYERS; BINDING; ACIDS;
D O I
10.1021/jp509348a
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The partition coefficient of chemicals from water to phospholipid membrane, K-lipw, is of central importance for various fields. For neutral organic molecules, log K-lipw correlates with the log of bulk solvent-water partition coefficients such as the octanol-water partition coefficient. However, this is not the case for charged compounds, for which a mechanistic modeling approach is highly necessary. In this work, we extend the model COSMOmic, which adapts the COSMO-RS theory for anisotropic phases and has been shown to reliably predict K-lipw for neutral compounds, to the use of ionic compounds. To make the COSMOmic model applicable for ionic solutes, we implemented the internal membrane dipole potential in COSMOmic. We empirically optimized the potential with experimental K-lipw data of 161 neutral and 75 ionic compounds, yielding potential shapes that agree well with experimentally determined potentials from the literature. This model refinement has no negative effect on the prediction accuracy of neutral compounds (root-mean-square error, RMSE = 0.62 log units), while it highly improves the prediction of ions (RMSE = 0.70 log units). The refined COSMOmic is, to our knowledge, the first mechanistic model that predicts K-lipw of both ionic and neutral species with accuracies better than 1 log unit.
引用
收藏
页码:14833 / 14842
页数:10
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