Application of Raman spectroscopy in the detection of hepatitis B virus infection

被引:52
|
作者
Tong, Dongni [1 ]
Chen, Cheng [2 ]
Zhang, JingJing [3 ]
Lv, GuoDong [4 ]
Zheng, Xiangxiang [2 ]
Zhang, Zhaoxia [1 ]
Lv, Xiaoyi [2 ]
机构
[1] Xinjiang Med Univ, Affiliated Hosp 1, Dept Lab Med, Urumqi 83001, Peoples R China
[2] Xinjiang Univ, Coll Informat Sci & Engn, Urumqi 830046, Peoples R China
[3] Xinjiang Med Univ, Affiliated Hosp 1, Imaging Ctr, Urumqi 830054, Peoples R China
[4] Xinjiang Med Univ, Affiliated Hosp 1, State Key Lab Pathogenesis Prevent & Treatment Ce, Urumqi 830054, Xinjiang, Peoples R China
关键词
Raman; HBV; serum; airPLS; PCA; SVM; Raman spectroscopy; DIFFERENTIATION; IDENTIFICATION;
D O I
10.1016/j.pdpdt.2019.08.006
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Objective: Detection of hepatitis B virus (HBV) using Raman spectroscopy. Methods: Raman spectroscopy was used to examine the serum samples of 500 patients with HBV and 500 non-HBV persons. First, the adaptive iterative weighted penalty least squares method (airPLS) was used to deduct the fluorescence background in Raman spectra. Then, a principal component analysis (PCA) was used to extract the processed Raman spectra, and a support vector machine (SVM) was used for modeling and prediction. The particle swarm optimization (PSO) algorithm was selected to optimize the parameters of the SVM instead of a traditional grid search. Finally, 600 serum samples were detected by Raman spectroscopy, and the results were verified using a double-blind method. Results: In the Raman spectra, the non-HBV human Raman peaks at 509, 957, 1002, 1153, 1260, 1512, 1648 and 2305 cm(-1) were different from those of patients with HBV. The reported accuracy, sensitivity and specificity of the HBV serum model established using airPLS-PCA-PSO-SVM was 93.1%, 100% and 88%, respectively. The two groups were verified by a double-blind method. In the first group sensitivity was 87%, specificity was 92%, and the KAPPA value was 0.79; in the second group sensitivity was 80%, specificity was 79%, and the KAPPA value was 0.59. Conclusion: This preliminary study shows that serum Raman spectroscopy combined with the airPLS-PCA-PSO-SVM model can be used for hepatitis B virus detection.
引用
收藏
页码:248 / 252
页数:5
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