Experimental and natural evidence of SARS-CoV-2-infection-induced activation of type I interferon responses

被引:43
作者
Banerjee, Arinjay [1 ,2 ,3 ,21 ]
El-Sayes, Nader [3 ,4 ]
Budylowski, Patrick [5 ]
Jacob, Rajesh Abraham [1 ,2 ,3 ]
Richard, Daniel [6 ]
Maan, Hassaan [7 ,8 ]
Aguiar, Jennifer A. [9 ]
Demian, Wael L. [1 ,2 ,3 ]
Baid, Kaushal [3 ,4 ]
D'Agostino, Michael R. [2 ,3 ,4 ]
Ang, Jann Catherine [2 ,3 ,4 ]
Murdza, Tetyana [3 ,4 ]
Tremblay, Benjamin J-M [9 ]
Afkhami, Sam [2 ,3 ,4 ]
Karimzadeh, Mehran [7 ]
Irving, Aaron T. [11 ,12 ]
Yip, Lily [13 ]
Ostrowski, Mario [14 ,15 ]
Hirota, Jeremy A. [2 ,16 ,17 ]
Kozak, Robert [13 ,18 ]
Capellini, Terence D. [6 ]
Miller, Matthew S. [2 ,3 ,4 ]
Wang, Bo [7 ,8 ,10 ,18 ]
Mubareka, Samira [13 ,18 ]
McGeer, Allison J. [19 ,20 ]
McArthur, Andrew G. [2 ,4 ]
Doxey, Andrew C. [2 ,9 ]
Mossman, Karen [1 ,2 ,3 ]
机构
[1] McMaster Univ, Dept Med, Hamilton, ON L8N 3Z5, Canada
[2] McMaster Univ, Michael G DeGroote Inst Infect Dis Res, Hamilton, ON L8S 4K1, Canada
[3] McMaster Univ, McMaster Immunol Res Ctr, Hamilton, ON L8S 4K1, Canada
[4] McMaster Univ, Dept Biochem & Biomed Sci, Hamilton, ON L8S 4K1, Canada
[5] Univ Toronto, Inst Med Sci, Toronto, ON M5S 1A8, Canada
[6] Harvard Univ, Dept Human Evolutionary Biol, Cambridge, MA 02138 USA
[7] Vector Inst Artificial Intelligence, Toronto, ON M5G 1M1, Canada
[8] Univ Hlth Network, Peter Munk Cardiac Ctr, Toronto, ON M5G 2C4, Canada
[9] Univ Waterloo, Dept Biol, Waterloo, ON N2L 3G1, Canada
[10] Univ Toronto, Dept Comp Sci, Toronto, ON M5S 2E4, Canada
[11] Zhejiang Univ, Univ Edinburgh Inst, Haining 314400, Zhejiang, Peoples R China
[12] Zhejiang Univ, Affiliated Hosp 2, Sch Med, Hangzhou 310027, Peoples R China
[13] Sunnybrook Res Inst, Toronto, ON M4N 3M5, Canada
[14] Univ Toronto, Dept Med, Toronto, ON M5S 3H2, Canada
[15] St Michaels Hosp, UnityHlth, Keenan Res Ctr Biomed Sci, Toronto, ON M5B 1W8, Canada
[16] McMaster Univ, Dept Med, Div Respirol, Hamilton, ON L8N 3Z5, Canada
[17] Univ British Columbia, Div Resp Med, Vancouver, BC V5Z 1M9, Canada
[18] Univ Toronto, Dept Lab Med & Pathobiol, Toronto, ON M5S 1A8, Canada
[19] Mt Sinai Hosp, Toronto, ON M5G 1X5, Canada
[20] Univ Toronto, Dalla Lana Sch Publ Hlth, Toronto, ON M5S 1A1, Canada
[21] Univ Saskatchewan, Dept Vet Microbiol, Vaccine & Infect Dis Org, Saskatoon, SK S7N 5E3, Canada
基金
加拿大健康研究院; 加拿大自然科学与工程研究理事会;
关键词
EAST RESPIRATORY SYNDROME; PAPAIN-LIKE PROTEASE; HUMAN CYTOMEGALOVIRUS; GROWTH-FACTORS; CORONAVIRUS; REPLICATION; PATHWAY; EXPRESSION; SARS; 4A;
D O I
10.1016/j.isci.2021.102477
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Type I interferons (IFNs) are our first line of defense against virus infection. Recent studies have suggested the ability of SARS-CoV-2 proteins to inhibit IFN responses. Emerging data also suggest that timing and extent of IFN production is associated withmanifestation of COVID-19 severity. In spite of progress in understanding how SARS-CoV-2 activates antiviral responses, mechanistic studies into wild-type SARS-CoV-2-mediated induction and inhibition of human type I IFN responses are scarce. Here we demonstrate that SARS-CoV-2 infection induces a type I IFN response in vitro and inmoderate cases of COVID-19. In vitro stimulation of type I IFN expression and signaling in human airway epithelial cells is associated with activation of canonical transcriptions factors, and SARS-CoV-2 is unable to inhibit exogenous induction of these responses. Furthermore, we show that physiological levels of IFNa detected in patients with moderate COVID-19 is sufficient to suppress SARS-CoV-2 replication in human airway cells.
引用
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页数:23
相关论文
共 83 条
[61]   Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap [J].
Reimand, Juri ;
Isserlin, Ruth ;
Voisin, Veronique ;
Kucera, Mike ;
Tannus-Lopes, Christian ;
Rostamianfar, Asha ;
Wadi, Lina ;
Meyer, Mona ;
Wong, Jeff ;
Xu, Changjiang ;
Merico, Daniele ;
Bader, Gary D. .
NATURE PROTOCOLS, 2019, 14 (02) :482-517
[62]   Platelet derived growth factor inhibitors: A potential therapeutic approach for ocular neovascularization [J].
Sadiq, Mohammad Ali ;
Hanout, Mostafa ;
Sarwar, Salman ;
Hassan, Muhammad ;
Do, Diana V. ;
Quan Dong Nguyen ;
Sepah, Yasir Jamal .
SAUDI JOURNAL OF OPHTHALMOLOGY, 2015, 29 (04) :287-291
[63]   A contemporary view of coronavirus transcription [J].
Sawicki, Stanley G. ;
Sawicki, Dorothea L. ;
Siddell, Stuart G. .
JOURNAL OF VIROLOGY, 2007, 81 (01) :20-29
[64]   Interferon-Stimulated Genes: What Do They All Do? [J].
Schoggins, John W. .
ANNUAL REVIEW OF VIROLOGY, VOL 6, 2019, 2019, 6 :567-584
[65]   Interferon-stimulated genes and their antiviral effector functions [J].
Schoggins, John W. ;
Rice, Charles M. .
CURRENT OPINION IN VIROLOGY, 2011, 1 (06) :519-525
[66]   Viral Evasion Strategies in Type I IFN Signaling - A Summary of Recent Developments [J].
Schulz, Katharina S. ;
Mossman, Karen L. .
FRONTIERS IN IMMUNOLOGY, 2016, 7
[67]   Cytoscape: A software environment for integrated models of biomolecular interaction networks [J].
Shannon, P ;
Markiel, A ;
Ozier, O ;
Baliga, NS ;
Wang, JT ;
Ramage, D ;
Amin, N ;
Schwikowski, B ;
Ideker, T .
GENOME RESEARCH, 2003, 13 (11) :2498-2504
[68]   Papain-like protease regulates SARS-CoV-2 viral spread and innate immunity [J].
Shin, Donghyuk ;
Mukherjee, Rukmini ;
Grewe, Diana ;
Bojkova, Denisa ;
Baek, Kheewoong ;
Bhattacharya, Anshu ;
Schulz, Laura ;
Widera, Marek ;
Mehdipour, Ahmad Reza ;
Tascher, Georg ;
Geurink, Paul P. ;
Wilhelm, Alexander ;
van der Heden van Noort, Gerbrand J. ;
Ovaa, Huib ;
Mueller, Stefan ;
Knobeloch, Klaus-Peter ;
Rajalingam, Krishnaraj ;
Schulman, Brenda A. ;
Cinatl, Jindrich ;
Hummer, Gerhard ;
Ciesek, Sandra ;
Dikic, Ivan .
NATURE, 2020, 587 (7835) :657-+
[69]   RETRACTED: Middle East Respiratory Syndrome Coronavirus 4a Protein Is a Double-Stranded RNA-Binding Protein That Suppresses PACT-Induced Activation of RIG-I and MDA5 in the Innate Antiviral Response (Retracted Article) [J].
Siu, Kam-Leung ;
Yeung, Man Lung ;
Kok, Kin-Hang ;
Yuen, Kit-San ;
Kew, Chun ;
Lui, Pak-Yin ;
Chan, Chi-Ping ;
Tse, Herman ;
Woo, Patrick C. Y. ;
Yuen, Kwok-Yung ;
Jin, Dong-Yan .
JOURNAL OF VIROLOGY, 2014, 88 (09) :4866-4876
[70]  
Soneson Charlotte, 2015, F1000Res, V4, P1521, DOI 10.12688/f1000research.7563.2