The complete chloroplast genome of Euphorbia hirta (Euphorbiaceae), a commonly used medicinal plant in China

被引：2

作者：

Zhang, Yancheng ^{[1
]}

Lu, Zhaocen ^{[2
]}

Zhang, Deng ^{[2
]}

Li, Jingjian ^{[1
]}

机构：

[1] Guilin Med Univ, Coll Pharm, Guilin, Peoples R China

[2] Chinese Acad Sci, Guangxi Inst Bot, Guilin, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2021年 / 6卷 / 08期

基金：

中国国家自然科学基金;

关键词：

Chloroplast genome; Euphorbia hirta; phylogenetic analysis;

D O I：

10.1080/23802359.2021.1945506

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Plants in the genus Euphorbia have been widely used as herbal medicine, and for ornamental horticulture and biofuel production. In this study, we report the complete chloroplast genome of Euphorbia hirta which is known as the 'asthma-plant' due to its medicinal use. The chloroplast genome of this species is 164,340 bp in length, including a pair of inverted repeat regions (IRs) (27,354 bp) that are divided by a large single-copy region (LSC) (91,373 bp) and a small single-copy region (SSC) (18,259 bp). The chloroplast genome of E. hirta contains 111 unique genes (77 protein-coding, 30 tRNA, and four rRNA), 19 of which are duplicated in the IR regions. The overall GC content is 35.4%. Phylogenetic analysis fully resolved E. hirta groups with other species of Euphorbia. The complete chloroplast genome of E. hirta provides useful information that can be used to distinguish related species and reconstruct evolutionary relationships.

引用

页码：2166 / 2168

页数：3

共 16 条

[11] CPGAVAS2, an integrated plastome sequence annotator and analyzer [J].

Shi, Linchun ;

Chen, Haimei ;

Jiang, Mei ;

Wang, Liqiang ;

Wu, Xi ;

Huang, Linfang ;

Liu, Chang .

NUCLEIC ACIDS RESEARCH, 2019, 47 (W1) :W65-W73

[12] RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies [J].

Stamatakis, Alexandros .

BIOINFORMATICS, 2014, 30 (09) :1312-1313

[13] GeSeq - versatile and accurate annotation of organelle genomes [J].

Tillich, Michael ;

Lehwark, Pascal ;

Pellizzer, Tommaso ;

Ulbricht-Jones, Elena S. ;

Fischer, Axel ;

Bock, Ralph ;

Greiner, Stephan .

NUCLEIC ACIDS RESEARCH, 2017, 45 (W1) :W6-W11

[14] Molecular phylogenetics and classification of Euphorbia subgenus Chamaesyce (Euphorbiaceae) [J].

Yang, Ya ;

Riina, Ricarda ;

Morawetz, Jeffery J. ;

Haevermans, Thomas ;

Aubriot, Xavier ;

Berry, Paul E. .

TAXON, 2012, 61 (04) :764-789

[15] Complete chloroplast genome of Sophora alopecuroides (Papilionoideae): molecular structures, comparative genome analysis and phylogenetic analysis [J].

Zha, Xi ;

Wang, Xiaoyang ;

Li, Jinrong ;

Gao, Fei ;

Zhou, Yijun .

JOURNAL OF GENETICS, 2020, 99 (01)

[16] Complete chloroplast genome of Euphorbia tirucalli (Euphorbiaceae), a potential biofuel plant [J].

Zhang, Ying ;

Shi, Yancai ;

Duan, Na ;

Liu, Bing-Bing ;

Mi, Jia .

MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1973-1974

← 1 2 →