Metabolomics as an extension of proteomic analysis: Study of acute kidney injury

被引:41
作者
Portilla, Didier [1 ]
Schnackenberg, Laura [2 ]
Beger, Richard D. [2 ]
机构
[1] Univ Arkansas Med Sci, Dept Nephrol, Little Rock, AR 72205 USA
[2] Natl Ctr Toxicol Res, Div Syst Toxicol, Jefferson, AR 72079 USA
关键词
metabolomics; acute kidney injury; cisplatin; nuclear magnetic resonance; mass spectrometry;
D O I
10.1016/j.semnephrol.2007.09.006
中图分类号
R5 [内科学]; R69 [泌尿科学(泌尿生殖系疾病)];
学科分类号
1002 ; 100201 ;
摘要
Although proteomics studies the global expression of proteins, metabolomics characterizes and quantifies their end products: the metabolites, produced by an organism under a certain set of conditions. From this perspective it is apparent that proteomics and metabolomics are complementary and when joined allow a fuller appreciation of an organism's phenotype. Our studies using H-1-nuclear magnetic resonance spectroscopic analysis showed the presence of glucose, amino acids, and trichloroacetic acid cycle metabolites in the urine after 48 hours of cisplatin administration. These metabolic alterations precede changes in serum creatinine. Biochemical studies confirmed the presence of glucosuria, but also showed the accumulation of nonesterified fatty acids, and triglycerides in serum, urine, and kidney tissue, despite increased levels of plasma insulin. These metabolic alterations were ameliorated by the use of fibrates. We propose that the injury-induced metabolic profile may be used as a biomarker of cisplatin-induced nephrotoxicity. These studies serve to illustrate that metabolomic studies add insight into pathophysiology not provided by proteomic analysis alone.
引用
收藏
页码:609 / 620
页数:12
相关论文
共 41 条
[1]   Hyperlipidaemia in cisplatin-induced nephrotic rats [J].
Abdel-Gayoum, AA ;
El-Jenjan, KB ;
Ghwarsha, KA .
HUMAN & EXPERIMENTAL TOXICOLOGY, 1999, 18 (07) :454-459
[2]   Investigation of the role of hyperbaric oxygen therapy in cisplatin-induced nephrotoxicity in rats [J].
Atasoyu, E ;
Yildiz, S ;
Bilgi, O ;
Cermik, H ;
Evrenkaya, R ;
Aktas, S ;
Gültepe, M ;
Kandemir, EG .
ARCHIVES OF TOXICOLOGY, 2005, 79 (05) :289-293
[3]   Metabonomic models of human pancreatic cancer using 1D proton NMR spectra of lipids in plasma [J].
Beger, Richard D. ;
Schnackenberg, Laura K. ;
Holland, Ricky D. ;
Li, Donghui ;
Dragan, Yvonne .
METABOLOMICS, 2006, 2 (03) :125-134
[4]   Pancreatic islet response to hyperglycemia is dependent on peroxisome proliferator-activated receptor alpha (PPARα) [J].
Bihan, H ;
Rouault, C ;
Reach, G ;
Poitout, V ;
Staels, B ;
Guerre-Millo, M .
FEBS LETTERS, 2005, 579 (11) :2284-2288
[5]  
Brindle JT, 2002, NAT MED, V8, P1439, DOI 10.1038/nm802
[6]   Role of the PPAR family of nuclear receptors in the regulation of metabolic and cardiovascular homeostasis: new approaches to therapy [J].
Chinetti-Gbaguidi, G ;
Fruchart, JC ;
Staels, B .
CURRENT OPINION IN PHARMACOLOGY, 2005, 5 (02) :177-183
[7]   An integrated metabonomic investigation of acetaminophen toxicity in the mouse using NMR spectroscopy [J].
Coen, M ;
Lenz, EM ;
Nicholson, JK ;
Wilson, ID ;
Pognan, F ;
Lindon, JC .
CHEMICAL RESEARCH IN TOXICOLOGY, 2003, 16 (03) :295-303
[8]   Tryptophan-NAD+ pathway metabolites as putative biomarkers and predictors of peroxisome proliferation [J].
Delaney, J ;
Hodson, MP ;
Thakkar, H ;
Connor, SC ;
Sweatman, BC ;
Kenny, SP ;
McGill, PJ ;
Holder, JC ;
Hutton, KA ;
Haselden, JN ;
Waterfield, CJ .
ARCHIVES OF TOXICOLOGY, 2005, 79 (04) :208-223
[9]   Protein kinase C ε signaling complexes include metabolism- and transcription/translation-related proteins -: Complimentary separation techniques with LC/MS/MS [J].
Edmondson, RD ;
Vondriska, TM ;
Biederman, KJ ;
Jun, Z ;
Jones, RC ;
Zheng, YT ;
Allen, DL ;
Xiu, JX ;
Cardwell, EM ;
Pisano, MR ;
Ping, PP .
MOLECULAR & CELLULAR PROTEOMICS, 2002, 1 (06) :421-433
[10]   Metabolomics - the link between genotypes and phenotypes [J].
Fiehn, O .
PLANT MOLECULAR BIOLOGY, 2002, 48 (1-2) :155-171