investigation of the role of the second, more recently described estrogen receptor, denoted ERP, will be critical in understanding the Molecular mechanisms underlying tissue-specific gene regulation by estrogens. Expression of ERP in a variety of tissues has been examined predominantly at the mRNA level, and there is little information regarding the cellular localization and size of the endogenous ER beta protein, due, in part, to the limited availability of human ER beta -specific antibodies. Thus, our aim was to generate specific antibodies to human ER beta and use them to determine the tissue-specific distribution and size(s) of the ER beta protein, To this end, we have cloned three different hybridoma cell lines that produce monoclonal antibodies specific for the hormone-binding domain of human ER beta. The antibodies, made in mice against human ER beta amino acids 256-505 (hormone binding domain lacking the F domain), are designated CFK-E12 (E12), CMK-A9 (A9) and CWK-F12 (1712) and were determined to be the IgG gamma1 isotype for E12, and IgG gamma 2b for A9 and F12. All three monoclonal antibodies could be used to detect in vitro translated, baculovirus expressed, and cell transfected and expressed ER beta protein by Western blot analyses, and all failed to detect ER alpha. A9 and F12 were able to immunoprecipitate efficiently the native form of ER beta protein in the presence and absence of estradiol. Epitope mapping studies indicate that the E12 and F12 antibodies recognize overlapping peptide sequences in the N-terminal region of the hormone-binding domain, a region that is highly conserved among species. Immunocytochemical studies with these antibodies reveal nuclear-specific localization of the ER beta protein in granulosa cells of the rat ovary. Nuclear ER beta is also specifically localized in epithelial and some stromal cells of mouse and rat epididymis. Western blot analysis with protein extracts from ovarian granulosa cells of human, rat, mouse, and pig showed a ca. 52 kDa and an additional ca. 62-64 kDa band in these species. These results indicate the presence of two predominant molecular size forms of the ER beta protein in ovarian granulosa cells and demonstrate the utility of these antibodies for detection of ER beta in the human and in several other mammalian species. (C) 2001 Elsevier Science Ireland Ltd. All rights reserved.