Synthesis and Properties of 5-Cyano-Substituted Nucleoside Analog with a Donor-Donor-Acceptor Hydrogen-Bonding Pattern

被引:12
|
作者
Kim, Hyo-Joong [1 ,2 ]
Chen, Fei [1 ,2 ,3 ]
Benner, Steven A. [1 ,2 ]
机构
[1] Fdn Appl Mol Evolut FfAME, Gainesville, FL 32601 USA
[2] Westheimer Inst Sci & Technol TWIST, Gainesville, FL 32601 USA
[3] Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing, Peoples R China
来源
JOURNAL OF ORGANIC CHEMISTRY | 2012年 / 77卷 / 07期
关键词
UNNATURAL BASE-PAIR; DNA; OLIGONUCLEOTIDES; RECOGNITION;
D O I
10.1021/jo300230z
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
6-Aminopyridin-2-ones form Watson-Crick pairs with complementary purine analogues to add a third nucleobase pair to DNA and RNA, if an electron-withdrawing group at position 5 slows oxidation and epimerization. In previous work with a nucleoside analogue trivially named dZ, the electron withdrawing unit was a nitro group. Here, we describe an analogue of dZ (cyanc-dZ) having a cyano group instead of a nitro group, including its synthesis, pK(a), rates of acid-catalyzed epimerization, and enzymatic incorporation.
引用
收藏
页码:3664 / 3669
页数:6
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