Synthesis and Properties of 5-Cyano-Substituted Nucleoside Analog with a Donor-Donor-Acceptor Hydrogen-Bonding Pattern

被引:12
|
作者
Kim, Hyo-Joong [1 ,2 ]
Chen, Fei [1 ,2 ,3 ]
Benner, Steven A. [1 ,2 ]
机构
[1] Fdn Appl Mol Evolut FfAME, Gainesville, FL 32601 USA
[2] Westheimer Inst Sci & Technol TWIST, Gainesville, FL 32601 USA
[3] Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing, Peoples R China
来源
JOURNAL OF ORGANIC CHEMISTRY | 2012年 / 77卷 / 07期
关键词
UNNATURAL BASE-PAIR; DNA; OLIGONUCLEOTIDES; RECOGNITION;
D O I
10.1021/jo300230z
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
6-Aminopyridin-2-ones form Watson-Crick pairs with complementary purine analogues to add a third nucleobase pair to DNA and RNA, if an electron-withdrawing group at position 5 slows oxidation and epimerization. In previous work with a nucleoside analogue trivially named dZ, the electron withdrawing unit was a nitro group. Here, we describe an analogue of dZ (cyanc-dZ) having a cyano group instead of a nitro group, including its synthesis, pK(a), rates of acid-catalyzed epimerization, and enzymatic incorporation.
引用
收藏
页码:3664 / 3669
页数:6
相关论文
共 50 条
  • [21] Synthesis, spectral and electrochemical properties of donor/acceptor substituted fluoroarylporphyrins
    Sen, A
    Krishnan, V
    TETRAHEDRON LETTERS, 1996, 37 (30) : 5421 - 5424
  • [22] SYNTHESIS AND TAUTOMERIC EQUILIBRIUM OF 6-AMINO-5-BENZYL-3-METHYLPYRAZIN-2-ONE - AN ACCEPTOR-DONOR-DONOR NUCLEOSIDE BASE ANALOG
    VOEGEL, JJ
    VONKROSIGK, U
    BENNER, SA
    JOURNAL OF ORGANIC CHEMISTRY, 1993, 58 (26): : 7542 - 7547
  • [23] Synthesis, physical properties, and chemistry of donor-acceptor-substituted pentacenes
    Lehnherr, Dan
    Adam, Matthias
    Murray, Adrian H.
    McDonald, Robert
    Hampel, Frank
    Tykwinski, Rik R.
    CANADIAN JOURNAL OF CHEMISTRY, 2017, 95 (03) : 303 - 314
  • [24] CHEMICAL, CONJUGATIVE AND COOPERATIVE EFFECTS IN HYDROGEN-BONDING - THE NATURAL BOND ORBITAL DONOR-ACCEPTOR PERSPECTIVE
    WEINHOLD, F
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1991, 202 : 106 - PHYS
  • [25] Symmetry Donor-Acceptor Molecule Regulating Hydrogen-Bonding Network for Improved Metal Zinc Anode
    Wang, Yongkang
    Liu, Xiao
    Li, Congcong
    Wang, Cunxin
    Li, Wenbin
    Yang, Beibei
    Ge, Cunwang
    Lu, Hongbin
    Qian, Tao
    Bin, Duan
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2024, 15 (42): : 10560 - 10569
  • [26] HYDROGEN-BONDING .9. SOLUTE PROTON DONOR AND PROTON ACCEPTOR SCALES FOR USE IN DRUG DESIGN
    ABRAHAM, MH
    DUCE, PP
    PRIOR, DV
    BARRATT, DG
    MORRIS, JJ
    TAYLOR, PJ
    JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1989, (10): : 1355 - 1375
  • [27] Hydrogen-Bonding Induced Alternate Stacking of Donor (D) and Acceptor (A) Chromophores and their Supramolecular Switching to Segregated States
    Das, Anindita
    Molla, Mijanur Rahaman
    Maity, Bholanath
    Koley, Debasis
    Ghosh, Suhrit
    CHEMISTRY-A EUROPEAN JOURNAL, 2012, 18 (32) : 9849 - 9859
  • [28] Hydrogen bonding patterns in the cocrystals of 5-nitrouracil with several donor and acceptor molecules
    Thomas, Reji
    Gopalan, R. Srinivasa
    Kulkarni, G. U.
    Rao, C. N. R.
    BEILSTEIN JOURNAL OF ORGANIC CHEMISTRY, 2005, 1
  • [29] Donor/acceptor-substituted anthradithiophene materials: synthesis, optical and electrochemical properties
    Balandier, Jean-Yves
    Quist, Florence
    Sebaihi, Noham
    Niebel, Claude
    Tylleman, Benoit
    Boudard, Pol
    Bouzakraoui, Said
    Lemaur, Vincent
    Cornil, Jerome
    Lazzaroni, Roberto
    Geerts, Yves Henri
    Stas, Sara
    TETRAHEDRON, 2011, 67 (37) : 7156 - 7161
  • [30] Donor- and/or Acceptor-Substituted Expanded Radialenes: Theory, Synthesis, and Properties
    Ramsaywack, Sharwatie
    Karaca, Sila
    Gholami, Mojtaba
    Murray, Adrian H.
    Hampel, Frank
    McDonald, Robert
    Elmaci, Nuran
    Luethi, Hans Peter
    Tykwinski, Rik R.
    JOURNAL OF ORGANIC CHEMISTRY, 2014, 79 (21): : 10013 - 10029