PHYLOGENY AND A NEW TRIBAL CLASSIFICATION OF THE PANICOIDEAE SL (POACEAE) BASED ON PLASTID AND NUCLEAR SEQUENCE DATA AND STRUCTURAL DATA

被引:55
|
作者
Gabriel Sanchez-Ken, J. [1 ]
Clark, Lynn G. [2 ]
机构
[1] Univ Nacl Autonoma Mexico, Inst Biol, Dept Bot, Mexico City 04510, DF, Mexico
[2] Iowa State Univ, Dept Ecol Evolut & Organismal Biol, Ames, IA 50011 USA
基金
美国国家科学基金会;
关键词
Arundinelleae; Centotheceae; Centothecoideae; Chasmanthieae; Cyperochloeae; granule-bound starch synthase I sequences; Panicoideae; plastid sequences; Tristachyideae; Zeugiteae; GRASS FAMILY POACEAE; MOLECULAR PHYLOGENY; ARUNDINOIDEAE POACEAE; GENE; PANICEAE; LIMITS; SUBFAMILIES; INFERENCE; ORIGINS; RPOC2;
D O I
10.3732/ajb.1000024
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Premise of the study : The subfamily Panicoideae (Poaceae) encompasses nearly one-third of the diversity of grass species, including important crops such as maize and sugarcane. Previous analyses recovered strong support for a Panicoideae+Centothecoideae lineage within the diverse Panicoideae+Arundinoideae+Chloridoideae+Micrairoideae+Aristidoideae+Danthonioideae (PACMAD) clade, although support for internal relationships was inconsistent. The objectives of this research were to (1) further test the monophyly of each subfamily and previously recovered clades within the Panicoideae+Centothecoideae lineage, (2) establish phylogenetic relationships among these groups, and (3) propose a new tribal classification for this lineage based explicitly on the phylogeny. Methods : Maximum parsimony and Bayesian inference analyses of 37 taxa were based on previously published sequences (ndhF and rpl16 intron) and on new plastid and nuclear (rbcL and granule-bound starch synthase I) sequence data as well as structural data. Key results. The Panicoideae+Centothecoideae lineage and a majority of the clades identified in previous analyses continue to be robustly supported, but resolution along the backbone of the topology remains elusive. Support for the monophyly of both subfamilies was lacking although support values for some clades increased. The tribes Centotheceae and Arundinelleae were confirmed as polyphyletic. Conclusions: Subfamily Centothecoideae is formally submerged into the Panicoideae, and a new tribal classification for the expanded Panicoideae is proposed based explicitly on the phylogeny. This classification includes 12 tribes of which Chasmanthieae and Zeugiteae are segretated from the Centotheceae; Tristachyideae is segregated from Arundinelleae, and a new tribe, Cyperochloeae, is validated to accommodate two isolated genera. A key to the tribes is provided.
引用
收藏
页码:1732 / 1748
页数:17
相关论文
共 50 条
  • [21] An expanded phylogeny of treefrogs (Hylidae) based on nuclear and mitochondrial sequence data
    Wiens, John J.
    Kuczynski, Caitlin A.
    Hua, Xia
    Moen, Daniel S.
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2010, 55 (03) : 871 - 882
  • [22] Phylogeny of Passerida (Aves: Passeriformes) based on nuclear and mitochondrial sequence data
    Ericson, PGP
    Johansson, US
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2003, 29 (01) : 126 - 138
  • [23] Phylogeny of the genus Zingiber (Zingiberaceae) based on nuclear ITS sequence data
    P. Theerakulpisut
    P. Triboun
    W. Mahakham
    D. Maensiri
    J. Khampila
    P. Chantaranothai
    Kew Bulletin, 2012, 67 (3) : 389 - 395
  • [24] Phylogeny of Eleusine (Poaceae: Chloridoideae) based on nuclear ITS and plastid trnT-trnF sequences
    Neves, SS
    Swire-Clark, G
    Hilu, KW
    Baird, WV
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2005, 35 (02) : 395 - 419
  • [25] Phylogeny of the characeae (class charophyceae) based on DNA sequence data from multiple plastid genes
    Karol, Kennet G.
    Sanders, Erin R.
    Kasper, Alan
    McCourt, Richard M.
    PHYCOLOGIA, 1997, 36 (04) : 46 - 46
  • [26] Cyphonanthus, a new genus segregated from Panicum (Poaceae: Panicoideae: Paniceae) based on morphological, anatomical and molecular data
    Morrone, Osvaldo
    Scataglini, M. Amalia
    Zuloaga, Fernando O.
    TAXON, 2007, 56 (02) : 521 - 532
  • [27] Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) with Hyb-Seq data: A new subtribal classification and a temporal diversification framework
    Herrando-Moraira, Sonia
    Antonio Calleja, Juan
    Galbany-Casals, Merce
    Garcia-Jacas, Nuria
    Liu, Jian-Quan
    Lopez-Alvarado, Javier
    Lopez-Pujol, Jordi
    Mandel, Jennifer R.
    Masso, Sergi
    Montes-Moreno, Noemi
    Roquet, Cristina
    Saez, Llorenc
    Sennikov, Alexander
    Susanna, Alfonso
    Vilatersana, Roser
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 137 : 313 - 332
  • [28] Molecular phylogeny and divergence times estimates of Lilium section Liriotypus (Liliaceae) based on plastid and nuclear ribosomal ITS DNA sequence data
    Ikinci, Nurse
    TURKISH JOURNAL OF BOTANY, 2011, 35 (04) : 319 - 330
  • [29] Multiple origins of Southern Hemisphere Anemone (Ranunculaceae) based on plastid and nuclear sequence data
    E. Schuettpelz
    S. B. Hoot
    R. Samuel
    F. Ehrendorfer
    Plant Systematics and Evolution, 2002, 231 : 143 - 151
  • [30] Multiple origins of Southern Hemisphere Anemone (Ranunculaceae) based on plastid and nuclear sequence data
    Schuettpelz, E
    Hoot, SB
    Samuel, R
    Ehrendorfer, F
    PLANT SYSTEMATICS AND EVOLUTION, 2002, 231 (1-4) : 143 - 151