Alteration of tumor suppressor BMP5 in sporadic colorectal cancer: a genomic and transcriptomic profiling based study

被引:47
作者
Chen, Erfei [1 ,2 ]
Yang, Fangfang [1 ]
He, Hongjuan [1 ,2 ]
Li, Qiqi [1 ,2 ]
Zhang, Wei [3 ]
Xing, Jinliang [4 ]
Zhu, Ziqing [1 ,2 ]
Jiang, Jingjing [1 ,5 ]
Wang, Hua [1 ,2 ]
Zhao, Xiaojuan [1 ,2 ]
Liu, Ruitao [1 ]
Lei, Lei [1 ,2 ]
Dong, Jing [1 ,2 ]
Pei, Yuchen [1 ,6 ]
Yang, Ying [1 ]
Pan, Junqiang [1 ]
Zhang, Pan [1 ,2 ]
Liu, Shuzhen [1 ,2 ]
Du, Le [1 ,2 ]
Zeng, Yuan [1 ]
Yang, Jin [1 ,2 ]
机构
[1] Northwest Univ, Sch Life Sci, Inst Prevent Genom Med, Xian 710069, Shaanxi, Peoples R China
[2] Northwest Univ, Sch Life Sci, Minist Educ, Key Lab Resource Biol & Biotechnol Western China, Xian 710069, Shaanxi, Peoples R China
[3] Fourth Mil Med Univ, Tangdu Hosp, Helmholtz Sinogerman Lab Canc Res, Dept Pathol, Xian 710038, Shaanxi, Peoples R China
[4] Fourth Mil Med Univ, State Key Lab Canc Biol, Xian, Shaanxi, Peoples R China
[5] Fourth Mil Med Univ, Expt Teaching Ctr Basic Med, Xian, Shaanxi, Peoples R China
[6] Chinese Acad Sci, Shanghai Adv Res Inst, Lab Syst Biol, 100 Haike Rd,Zhangjiang Hitech Pk, Shanghai 201210, Peoples R China
关键词
BMP5; Tumor suppressor; Loss of function mutation; Driver gene; Sporadic colorectal cancer;
D O I
10.1186/s12943-018-0925-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
BackgroundAlthough the genetic spectrum of human colorectal cancer (CRC) is mainly characterized by APC, KRAS and TP53 mutations, driver genes in tumor initiation have not been conclusively demonstrated. In this study, we aimed to identify novel markers for CRC.MethodsWe performed exome analysis of sporadic colorectal cancer (sCRC) coding regions to screen loss of function (LoF) mutation genes, and carried out systems-level approaches to confirm top rank gene in this study.ResultsWe identified loss of BMP5 is an early event in CRC. Deep sequencing identified BMP5 was mutated in 7.7% (8/104) of sCRC samples, with 37.5% truncating mutation frequency. Notably, BMP5 negative expression and its prognostic value is uniquely significant in sCRC but not in other tumor types. Furthermore, BMP5 expression was positively correlated with E-cadherin in CRC patients and its dysregulation play a vital role in epithelial-mesenchymal transition (EMT), thus triggering tumor initiation and development. RNA sequencing identified, independent of BMP/Smads pathway, BMP5 signaled though Jak-Stat pathways to inhibit the activation of oncogene EPSTI1.ConclusionsOur result support a novel concept that the importance of BMP5 in sCRC. The tumor suppressor role of BMP5 highlights its crucial role in CRC initiation and development.
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页数:13
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