DNA microarrays

被引:0
作者
Biesen, R. [1 ]
Haeupl, T. [1 ]
机构
[1] Charite Univ Med Berlin, Med Klin Schwerpunkt Rheumatol & Klin Immunol, D-10117 Berlin, Germany
来源
ZEITSCHRIFT FUR RHEUMATOLOGIE | 2011年 / 70卷 / 09期
关键词
Clinical rheumatology; Oligonucleotide array sequence analysis; Gene expression; Biomarkers; Immunological reaction pattern; SYSTEMIC-LUPUS-ERYTHEMATOSUS; INTERFERON; BIOMARKER; DISEASE;
D O I
10.1007/s00393-011-0869-4
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Since their development in the 1990s DNA microarrays have advanced to one of the most important technologies for biomedical research. Miniaturization enables up to 1 million different sequence-specific DNA hybridization tests to be performed on an area of less than 2 cm(2). Depending on the selection of oligonucleotide sequences, which are assembled on a microarray and on the treatment of samples prior to hybridization, up to genome-wide analyses for genotypes, gene expression, epigenetic changes or promoter activation can be performed. Increasing knowledge about the human genome advances commercial pre-assembly of DNA microarrays with selected oligonucleotide sequences for specialized applications. In clinical rheumatology gene expression analyses in treatment studies are of increasing importance. Similarly, this technique also identified new biomarkers that allow even better assessment of the current disease activity. The varieties of application enable the possibility of systematic research on the immunological response to specific patterns after stimulation. This opens up opportunities to detect and differentiate immunological reaction patterns better.
引用
收藏
页码:803 / +
页数:5
相关论文
共 8 条
[1]   Interferon and granulopoiesis signatures in systemic lupus erythematosus blood [J].
Bennett, L ;
Palucka, AK ;
Arce, E ;
Cantrell, V ;
Borvak, J ;
Banchereau, J ;
Pascual, V .
JOURNAL OF EXPERIMENTAL MEDICINE, 2003, 197 (06) :711-723
[2]   Sialic acid-binding Ig-like lectin I expression in inflammatory and resident monocytes is a potential biomarker for monitoring disease activity and success of therapy in systemic lupus erythematosus [J].
Biesen, Robert ;
Demir, Cemal ;
Barkhudarova, Fidan ;
Gruen, Joachim R. ;
Steinbrich-Zoellner, Marta ;
Backhaus, Marina ;
Haeupl, Thomas ;
Rudwaleit, Martin ;
Riemekasten, Gabriela ;
Radbruch, Andreas ;
Hiepe, Falk ;
Burmester, Gerd-Ruediger ;
Gruetzkau, Andreas .
ARTHRITIS AND RHEUMATISM, 2008, 58 (04) :1136-1145
[3]   Minimum information about a microarray experiment (MIAME) - toward standards for microarray data [J].
Brazma, A ;
Hingamp, P ;
Quackenbush, J ;
Sherlock, G ;
Spellman, P ;
Stoeckert, C ;
Aach, J ;
Ansorge, W ;
Ball, CA ;
Causton, HC ;
Gaasterland, T ;
Glenisson, P ;
Holstege, FCP ;
Kim, IF ;
Markowitz, V ;
Matese, JC ;
Parkinson, H ;
Robinson, A ;
Sarkans, U ;
Schulze-Kremer, S ;
Stewart, J ;
Taylor, R ;
Vilo, J ;
Vingron, M .
NATURE GENETICS, 2001, 29 (04) :365-371
[4]   A CD8+ T cell transcription signature predicts prognosis in autoimmune disease [J].
McKinney, Eoin F. ;
Lyons, Paul A. ;
Carr, Edward J. ;
Hollis, Jane L. ;
Jayne, David R. W. ;
Willcocks, Lisa C. ;
Koukoulaki, Maria ;
Brazma, Alvis ;
Jovanovic, Vojislav ;
Kemeny, D. Michael ;
Pollard, Andrew J. ;
MacAry, Paul A. ;
Chaudhry, Afzal N. ;
Smith, Kenneth G. C. .
NATURE MEDICINE, 2010, 16 (05) :586-U122
[5]   Defining TNF-α- and LPS-induced gene signatures in monocytes to unravel the complexity of peripheral blood transcriptomes in health and disease [J].
Smiljanovic, Biljana ;
Gruen, Joachim R. ;
Steinbrich-Zoellner, Marta ;
Stuhlmueller, Bruno ;
Haeupl, Thomas ;
Burmester, Gerd R. ;
Radbruch, Andreas ;
Gruetzkau, Andreas ;
Baumgrass, Ria .
JOURNAL OF MOLECULAR MEDICINE-JMM, 2010, 88 (10) :1065-1079
[6]   CD11c as a Transcriptional Biomarker to Predict Response to Anti-TNF Monotherapy With Adalimumab in Patients With Rheumatoid Arthritis [J].
Stuhlmueller, B. ;
Haeupl, T. ;
Hernandez, M. M. ;
Gruetzkau, A. ;
Kuban, R-J ;
Tandon, N. ;
Voss, J. W. ;
Salfeld, J. ;
Kinne, R. W. ;
Burmester, G. R. .
CLINICAL PHARMACOLOGY & THERAPEUTICS, 2010, 87 (03) :311-321
[7]   Human lupus T cells resist inactivation and escape death by upregulating COX-2 [J].
Xu, LT ;
Zhang, L ;
Yi, YJ ;
Kang, HK ;
Datta, SK .
NATURE MEDICINE, 2004, 10 (04) :411-415
[8]   Neutralization of Interferon-α/β-Inducible Genes and Downstream Effect in a Phase I Trial of an Anti-Interferon-α Monoclonal Antibody in Systemic Lupus Erythematosus [J].
Yao, Yihong ;
Richman, Laura ;
Higgs, Brandon W. ;
Morehouse, Christopher A. ;
de los Reyes, Melissa ;
Brohawn, Philip ;
Zhang, Jianliang ;
White, Barbara ;
Coyle, Anthony J. ;
Kiener, Peter A. ;
Jallal, Bahija .
ARTHRITIS AND RHEUMATISM, 2009, 60 (06) :1785-1796