Spring-loading the active site of cytochrome P450cam

被引:12
作者
Dang, Marina [1 ]
Pochapskya, Susan Sondej [1 ]
Pochapsky, Thomas C. [1 ,2 ]
机构
[1] Brandeis Univ, Dept Chem, Waltham, MA 02454 USA
[2] Brandeis Univ, Rosenstiel Basic Med Sci Res Inst, Waltham, MA 02454 USA
基金
美国国家卫生研究院;
关键词
CRYSTAL-STRUCTURE; STRUCTURAL BASIS; SUBSTRATE; SPECIFICITY; RECOGNITION; MODEL; SPIN;
D O I
10.1039/c0mt00065e
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A hydrogen bond network has been identified that adjusts protein-substrate contacts in cytochrome P450(cam) (CYP101A1). Replacing the native substrate camphor with adamantanone or norcamphor causes perturbations in NMR-detected NH correlations assigned to the network, which includes portions of a beta sheet and an adjacent helix that is remote from the active site. A mutation in this helix reduces enzyme efficiency and perturbs the extent of substrate-induced spin state changes at the haem iron that accompany substrate binding. In turn, the magnitude of the spin state changes induced by alternate substrate binding parallel the NMR-detected perturbations observed near the haem in the enzyme active site.
引用
收藏
页码:339 / 343
页数:5
相关论文
共 21 条
[1]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[2]   Structural and Dynamic Implications of an Effector-induced Backbone Amide cis-trans Isomerization in Cytochrome P450cam [J].
Asciutto, Eliana K. ;
Madura, Jeffry D. ;
Pochapsky, Susan Sondej ;
OuYang, Bo ;
Pochapsky, Thomas C. .
JOURNAL OF MOLECULAR BIOLOGY, 2009, 388 (04) :801-814
[3]   MOLECULAR RECOGNITION IN CYTOCHROME-P-450 - ALTERATION OF REGIOSELECTIVE ALKANE HYDROXYLATION VIA PROTEIN ENGINEERING [J].
ATKINS, WM ;
SLIGAR, SG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (07) :2715-2717
[4]  
Bell SG, 2003, BIOCHEM SOC T, V31, P558, DOI 10.1042/bst0310558
[5]   Structure of cytochrome P450eryF: Substrate, inhibitors, and model compounds bound in the active site [J].
CuppVickery, JR ;
Poulos, TL .
STEROIDS, 1997, 62 (01) :112-116
[6]  
DELANO WL, 2008, PYMOL MOL VISUALIZAT
[7]   Substrate docking algorithms and prediction of the substrate specificity of cytochrome P450(cam) and its L244A mutant [J].
DeVoss, JJ ;
Sibbesen, O ;
Zhang, ZP ;
deMontellano, PRO .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1997, 119 (24) :5489-5498
[8]   Structural basis for androgen specificity and oestrogen synthesis in human aromatase [J].
Ghosh, Debashis ;
Griswold, Jennifer ;
Erman, Mary ;
Pangborn, Walter .
NATURE, 2009, 457 (7226) :219-U119
[9]   CRYSTAL-STRUCTURE AND REFINEMENT OF CYTOCHROME P450(TERP) AT 2-CENTER-DOT-3 ANGSTROM RESOLUTION [J].
HASEMANN, CA ;
RAVICHANDRAN, KG ;
PETERSON, JA ;
DEISENHOFER, J .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 236 (04) :1169-1185
[10]   Laboratory evolution of peroxide-mediated cytochrome P450 hydroxylation [J].
Joo, H ;
Lin, ZL ;
Arnold, FH .
NATURE, 1999, 399 (6737) :670-673