LIPOSOMES ON A STREPTAVIDIN CRYSTAL: A SYSTEM TO STUDY MEMBRANE PROTEINS BY CRYO-EM

被引:22
作者
Wang, Liguo [1 ]
Sigworth, Fred J. [1 ]
机构
[1] Yale Univ, Dept Cellular & Mol Physiol, New Haven, CT 06520 USA
来源
METHODS IN ENZYMOLOGY, VOL 481: CRYO-EM, PART A - SAMPLE PREPARATION AND DATA COLLECTION | 2010年 / 481卷
关键词
BIOTINYLATED MACROMOLECULES; 2-DIMENSIONAL CRYSTALS; ELECTRON-MICROSCOPY; CORE STREPTAVIDIN; POTASSIUM CHANNEL; LIPID-MEMBRANE; RESOLUTION; BINDING; RECONSTITUTION; ARRAYS;
D O I
10.1016/S0076-6879(10)81007-9
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In this chapter, we describe the preparation of cryo-EM specimens for random spherically constrained (RSC) single-particle reconstruction of membrane proteins. The specimen consists of liposomes into which the purified membrane protein is reconstituted at low density. The substrate is a 2D streptavidin crystal, which serves as an affinity surface that tethers the liposomes, which are doped with biotinylated lipids; the crystal can also serve as an image-quality and image-calibration reference. After subtraction of the crystal and lipid membrane contributions to the image, the remaining particle images can be used for 3D reconstruction.
引用
收藏
页码:147 / 164
页数:18
相关论文
共 41 条
  • [31] A direct-imaging cryo-EM study of shedding extracellular vesicles from leukemic monocytes
    Koiffman, Na'ama
    Biran, Idan
    Aharon, Anat
    Brenner, Benjamin
    Talmon, Yeshayahu
    JOURNAL OF STRUCTURAL BIOLOGY, 2017, 198 (03) : 177 - 185
  • [32] Using a partial atomic model from medium-resolution cryo-EM to solve a large crystal structure
    Fabrega-Ferrer, Montserrat
    Cuervo, Ana
    Fernandez, Francisco J.
    Machon, Cristina
    Perez-Luque, Rosa
    Pous, Joan
    Vega, M. Cristina
    Carrascosa, Jose L.
    Coll, Miquel
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2021, 77 : 11 - 18
  • [33] findMySequence: a neural-network-based approach for identification of unknown proteins in X-ray crystallography and cryo-EM
    Chojnowski, Grzegorz
    Simpkin, Adam J.
    Leonardo, Diego A.
    Seifert-Davila, Wolfram
    Vivas-Ruiz, Dan E.
    Keegan, Ronan M.
    Rigden, Daniel J.
    IUCRJ, 2022, 9 : 86 - +
  • [34] Direct Visualization by Cryo-EM of the Mycobacterial Capsular Layer: A Labile Structure Containing ESX-1-Secreted Proteins
    Sani, Musa
    Houben, Edith N. G.
    Geurtsen, Jeroen
    Pierson, Jason
    de Punder, Karin
    van Zon, Maaike
    Wever, Brigitte
    Piersma, Sander R.
    Jimenez, Connie R.
    Daffe, Mamadou
    Appelmelk, Ben J.
    Bitter, Wilbert
    van der Wel, Nicole
    Peters, Peter J.
    PLOS PATHOGENS, 2010, 6 (03)
  • [35] Fuzzy Inference System as decision-maker to automate cryo-EM data acquisition on a transmission electron microscope
    Gil-Carton, David
    Valle, Mikel
    Garrido, Aitor J.
    Garrido, Izaskun
    Miguel, Inigo
    2015 IEEE INTERNATIONAL CONFERENCE ON COMPUTATIONAL INTELLIGENCE AND VIRTUAL ENVIRONMENTS FOR MEASUREMENT SYSTEMS AND APPLICATIONS (CIVEMSA), 2015, : 91 - 96
  • [36] Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism
    Kalynych, Sergei
    Fuzik, Tibor
    Pridal, Antonin
    de Miranda, Joachim
    Plevka, Pavel
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (03) : 598 - 603
  • [37] Cryo-EM study of Hepatitis B virus core antigen capsids decorated with antibodies from a human patient
    Kandiah, Eaazhisai
    Watts, Norman R.
    Cheng, Naigian
    Cardone, Giovanni
    Stahl, Stephen J.
    Heller, Theo
    Liang, T. Jake
    Wingfield, Paul T.
    Steven, Alasdair C.
    JOURNAL OF STRUCTURAL BIOLOGY, 2012, 177 (01) : 145 - 151
  • [38] A Time-Resolved Cryo-EM Study of Saccharomyces cerevisiae 80S Ribosome Protein Composition in Response to a Change in Carbon Source
    Sun, Ming
    Shen, Bingxin
    Li, Wen
    Samir, Parimal
    Browne, Christopher M.
    Link, Andrew J.
    Frank, Joachim
    PROTEOMICS, 2021, 21 (02)
  • [39] An immobilized antibody-based affinity grid strategy for on-grid purification of target proteins enables high-resolution cryo-EM
    Zhao, Qiaoyu
    Hong, Xiaoyu
    Wang, Yanxing
    Zhang, Shaoning
    Ding, Zhanyu
    Meng, Xueming
    Song, Qianqian
    Hong, Qin
    Jiang, Wanying
    Shi, Xiangyi
    Cai, Tianxun
    Cong, Yao
    COMMUNICATIONS BIOLOGY, 2024, 7 (01)
  • [40] Advances in cryo-EM and ED with a cold-field emission beam and energy filtration -Refinements of the CRYO ARM 300 system in RIKEN SPring-8 center-
    Maki-Yonekura, Saori
    Hamaguchi, Tasuku
    Naitow, Hisashi
    Takaba, Kiyofumi
    Yonekura, Koji
    MICROSCOPY, 2021, 70 (02) : 232 - 240