Ligand-dependent regulatory RNA parts for Synthetic Biology in eukaryotes

被引:15
作者
Wieland, Markus [1 ]
Fussenegger, Martin [1 ]
机构
[1] Swiss Fed Inst Technol, Dept Biosyst Sci & Bioengn D BSSE, CH-4058 Basel, Switzerland
基金
瑞士国家科学基金会;
关键词
GENE-EXPRESSION; MAMMALIAN-CELLS; EXOGENOUS CONTROL; POLYMERASE-II; SELF-CLEAVAGE; APTAMER; TRANSLATION; INTERFERENCE; RECOGNITION; INHIBITION;
D O I
10.1016/j.copbio.2010.06.010
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Artificial regulatory RNAs have been attracting more and more interest over the past years. Their small size, combined with versatile applications, make them promising tools for designing complex eukaryotic gene networks. A variety of such regulatory RNA parts have been developed that are capable of efficiently controlling gene expression. A common basis for many of these genetic switches is the specific ligand binding to a RNA domain, followed by a conformational change. Depending on the surroundings, this can affect transcription, translation or even RNA interference (RNAi) efficacy. This article provides a concise summary of the main controllable RNA parts thus far developed for eukaryotic systems.
引用
收藏
页码:760 / 765
页数:6
相关论文
共 37 条
[1]   Functional expression of ribozymes in Apicomplexa: Towards exogenous control of gene expression by inducible RNA-cleavage [J].
Agop-Nersesian, Carolina ;
Pfahler, Judith ;
Lanzer, Michael ;
Meissner, Markus .
INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2008, 38 (06) :673-681
[2]   Artificial control of gene expression in mammalian cells by modulating RNA interference through aptamer-small molecule interaction [J].
An, CI ;
Trinh, VB ;
Yokobayashi, Y .
RNA, 2006, 12 (05) :710-716
[3]   A ligand-dependent hammerhead ribozyme switch for controlling mammalian gene expression [J].
Auslaender, Simon ;
Ketzer, Patrick ;
Hartig, Joerg S. .
MOLECULAR BIOSYSTEMS, 2010, 6 (05) :807-814
[4]   Programmable ligand-controlled riboregulators of eukaryotic gene expression [J].
Bayer, TS ;
Smolke, CD .
NATURE BIOTECHNOLOGY, 2005, 23 (03) :337-343
[5]   Engineering a ligand-dependent RNA transcriptional activator [J].
Buskirk, AR ;
Landrigan, A ;
Liu, DR .
CHEMISTRY & BIOLOGY, 2004, 11 (08) :1157-1163
[6]   In vivo recognition of an RNA aptamer by its transcription factor target [J].
Cassiday, LA ;
Maher, LJ .
BIOCHEMISTRY, 2001, 40 (08) :2433-2438
[7]   Design Principles for Ligand-Sensing, Conformation-Switching Ribozymes [J].
Chen, Xi ;
Ellington, Andrew D. .
PLOS COMPUTATIONAL BIOLOGY, 2009, 5 (12)
[8]   Genetic control of mammalian T-cell proliferation with synthetic RNA regulatory systems [J].
Chen, Yvonne Y. ;
Jensen, Michael C. ;
Smolke, Christina D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (19) :8531-8536
[9]   siRNAs: Applications in functional genomics and potential as therapeutics [J].
Dorsett, Y ;
Tuschl, T .
NATURE REVIEWS DRUG DISCOVERY, 2004, 3 (04) :318-329
[10]   INVITRO SELECTION OF RNA MOLECULES THAT BIND SPECIFIC LIGANDS [J].
ELLINGTON, AD ;
SZOSTAK, JW .
NATURE, 1990, 346 (6287) :818-822