Data driven time-varying SEIR-LSTM/GRU algorithms to track the spread of COVID-19

被引:5
作者
Feng, Lin [1 ]
Chen, Ziren [1 ]
Lay, Harold A., Jr. [2 ]
Furati, Khaled [3 ]
Khaliq, Abdul [4 ]
机构
[1] Iowa State Univ, Dept Math, Ames, IA 50011 USA
[2] Thompson Machinery Commerce Corp, 1245 Bridgestone Blvd, La Vergne, TN 37086 USA
[3] King Fahd Univ Petr & Minerals, Dept Math, Dhahran 31261, Saudi Arabia
[4] Middle Tennessee State Univ, Dept Math Sci, Murfreesboro, TN 37132 USA
关键词
SEIR; LSTM; GRU; time-varying parameters; data-driven; COVID-19; time-varying reproduction number;
D O I
10.3934/mbe.2022415
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
COVID-19 is an infectious disease caused by a newly discovered coronavirus, which has become a worldwide pandemic greatly impacting our daily life and work. A large number of mathematical models, including the susceptible-exposed-infected-removed (SEIR) model and deep learning methods, such as long-short-term-memory (LSTM) and gated recurrent units (GRU)-based methods, have been employed for the analysis and prediction of the COVID-19 outbreak. This paper describes a SEIR-LSTM/GRU algorithm with time-varying parameters that can predict the number of active cases and removed cases in the US. Time-varying reproductive numbers that can illustrate the progress of the epidemic are also produced via this process. The investigation is based on the active cases and total cases data for the USA, as collected from the website "Worldometer". The root mean square error, mean absolute percentage error and r(2) score were utilized to assess the model's accuracy.
引用
收藏
页码:8935 / 8962
页数:28
相关论文
共 38 条
[1]  
[Anonymous], 2021, COR CAS
[2]   Incubation period of 2019 novel coronavirus (2019-nCoV) infections among travellers from Wuhan, China, 20-28 January 2020 [J].
Backer, Jantien A. ;
Klinkenberg, Don ;
Wallinga, Jacco .
EUROSURVEILLANCE, 2020, 25 (05) :10-15
[3]  
BBCnews, 2020, CORONAVIRUS DIS NAME
[4]   Parameter estimation and prediction for coronavirus disease outbreak 2019 (COVID-19) in Algeria [J].
Bentout, Soufiane ;
Chekroun, Abdennasser ;
Kuniya, Toshikazu .
AIMS PUBLIC HEALTH, 2020, 7 (02) :306-318
[5]  
Brauer F, 2008, Compartmental Models in Epidemiology BT - Mathematical Epidemiology, DOI [DOI 10.1007/978-3-540-78911-62, 10.1007/978-3-540-78911-6, DOI 10.1007/978-3-540-78911-6_2]
[6]  
CDC, 2020, COR DIS 2019 COVID 1
[7]   SEIR model with unreported infected population and dynamic parameters for the spread of COVID-19 [J].
Chen, Ziren ;
Feng, Lin ;
Lay, Harold A., Jr. ;
Furati, Khaled ;
Khaliq, Abdul .
MATHEMATICS AND COMPUTERS IN SIMULATION, 2022, 198 :31-46
[8]  
Cho K., PREPRINT
[9]  
DIEKMANN O, 1990, J MATH BIOL, V28, P365
[10]  
DRAPER N.R., 1968, APPL REGRESSION ANAL, DOI [10.1002/9781118625590, DOI 10.1002/9781118625590]