Online object oriented Monte Carlo computational tool for the needs of biomedical optics

被引:130
作者
Doronin, Alexander [1 ]
Meglinski, Igor [1 ]
机构
[1] Univ Otago, Dept Phys, Jack Dodd Ctr Quantum Technol, Dunedin 9054, New Zealand
来源
BIOMEDICAL OPTICS EXPRESS | 2011年 / 2卷 / 09期
关键词
COHERENCE TOMOGRAPHY IMAGES; TURBID MEDIA; MULTIPLE-SCATTERING; LIGHT TRANSPORT; PART I; SIMULATION; SKIN; SPECTRA; TISSUES; SIGNAL;
D O I
10.1364/BOE.2.002461
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Conceptual engineering design and optimization of laser-based imaging techniques and optical diagnostic systems used in the field of biomedical optics requires a clear understanding of the light-tissue interaction and peculiarities of localization of the detected optical radiation within the medium. The description of photon migration within the turbid tissue-like media is based on the concept of radiative transfer that forms a basis of Monte Carlo (MC) modeling. An opportunity of direct simulation of influence of structural variations of biological tissues on the probing light makes MC a primary tool for biomedical optics and optical engineering. Due to the diversity of optical modalities utilizing different properties of light and mechanisms of light-tissue interactions a new MC code is typically required to be developed for the particular diagnostic application. In current paper introducing an object oriented concept of MC modeling and utilizing modern web applications we present the generalized online computational tool suitable for the major applications in biophotonics. The computation is supported by NVIDEA CUDA Graphics Processing Unit providing acceleration of modeling up to 340 times. (C) 2011 Optical Society of America
引用
收藏
页码:2461 / 2469
页数:9
相关论文
共 43 条
  • [1] [Anonymous], HDB BIOMEDICAL OPTIC
  • [2] [Anonymous], 2010, C U D A PROGR GUID 3
  • [3] Review of biomedical optical imaging-a powerful, non-invasive, non-ionizing technology for improving in vivo diagnosis
    Balas, Costas
    [J]. MEASUREMENT SCIENCE AND TECHNOLOGY, 2009, 20 (10)
  • [4] Berrocal E, 2006, LASER PHYS LETT, V3, P464, DOI [10.1002/lapl.200610035, 10.1002/lap1.200610035]
  • [5] Laser light scattering in turbid media part I: Experimental and simulated results for the spatial intensity distribution
    Berrocal, Edouard
    Sedarsky, David L.
    Paciaroni, Megan E.
    Meglinski, Igor V.
    Linne, Mark A.
    [J]. OPTICS EXPRESS, 2007, 15 (17): : 10649 - 10665
  • [6] Three dimensional Monte Carlo code for photon migration through complex heterogeneous media including the adult human head
    Boas, DA
    Culver, JP
    Stott, JJ
    Dunn, AK
    [J]. OPTICS EXPRESS, 2002, 10 (03): : 159 - 170
  • [7] Amending of fluorescence sensor signal localization in human skin by matching of the refractive index
    Churmakov, DY
    Meglinski, IV
    Greenhalgh, DA
    [J]. JOURNAL OF BIOMEDICAL OPTICS, 2004, 9 (02) : 339 - 346
  • [8] Analysis of skin tissues spatial fluorescence distribution by the Monte Carlo simulation
    Churmakov, DY
    Meglinski, IV
    Piletsky, SA
    Greenhalgh, DA
    [J]. JOURNAL OF PHYSICS D-APPLIED PHYSICS, 2003, 36 (14) : 1722 - 1728
  • [9] Development of the radiative transfer theory as applied to instrumental imaging in turbid media
    Dolin, L. S.
    [J]. PHYSICS-USPEKHI, 2009, 52 (05) : 519 - 526
  • [10] Mesh-based Monte Carlo method using fast ray-tracing in Plucker coordinates
    Fang, Qianqian
    [J]. BIOMEDICAL OPTICS EXPRESS, 2010, 1 (01): : 165 - 175