The complete mitochondrial genome of basiprionota bisignata (Boheman, 1862) (Coleoptera: Chrysomelidae)

被引:0
作者
Cheng, Shaochuan [1 ]
Yuan, Huimin [2 ]
Wang, Ting [2 ]
Hu, Kai [1 ]
机构
[1] Guizhou Acad Forestry, Guiyang, Peoples R China
[2] Forestry Adm Yinjiang Cty, Tongren, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 03期
关键词
Mitogenome; phylogenetic analysis; Cassidinae; Basiprionota; SEQUENCE;
D O I
10.1080/23802359.2022.2047117
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genome of Basiprionota bisignata (Boheman, 1862) (a species of leaf beetles) was successfully sequenced, annotated, and analyzed in this study. This mitochondrial genome is a circular DNA molecule of 16,069 bp in size with 78.5% AT content, including 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and an AT-rich region (control region). The gene order is consistent with the putative ancestral arrangement of insects. All PCGs are initiated by ATN (A/T/C/G) condons and terminated with TAA/G or their incomplete form single T-. All tRNAs can be folded into common clover leaf secondary structures, except for trnS1. The phylogenetic tree was reconstructed using maximum likelihood analysis, and the topology recovered the monophyly of Cassidinae and the sister relationship between Basiprionota and the clade (Thlaspida + Aspidomorph).
引用
收藏
页码:440 / 442
页数:3
相关论文
共 11 条
[1]  
Borowiec L., 2002, Cassidinae of the World - an interactive manual (Coleoptera: Chrysomelidae)
[2]  
Borowiec Lech, 1999, P1
[3]   Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny [J].
Cameron, Stephen L. .
ANNUAL REVIEW OF ENTOMOLOGY, VOL 59, 2014, 2014, 59 :95-117
[4]   THE MITOCHONDRIAL-DNA MOLECULE OF DROSOPHILA-YAKUBA - NUCLEOTIDE-SEQUENCE, GENE ORGANIZATION, AND GENETIC-CODE [J].
CLARY, DO ;
WOLSTENHOLME, DR .
JOURNAL OF MOLECULAR EVOLUTION, 1985, 22 (03) :252-271
[5]   NOVOPlasty: de novo assembly of organelle genomes from whole genome data [J].
Dierckxsens, Nicolas ;
Mardulyn, Patrick ;
Smits, Guillaume .
NUCLEIC ACIDS RESEARCH, 2017, 45 (04)
[6]   Multilocus ribosomal RNA phylogeny of the leaf beetles (Chrysomelidae) [J].
Gomez-Zurita, Jesus ;
Hunt, Toby ;
Vogler, Alfried P. .
CLADISTICS, 2008, 24 (01) :34-50
[7]   aLeaves facilitates on-demand exploration of metazoan gene family trees on MAFFT sequence alignment server with enhanced interactivity [J].
Kuraku, Shigehiro ;
Zmasek, Christian M. ;
Nishimura, Osamu ;
Katoh, Kazutaka .
NUCLEIC ACIDS RESEARCH, 2013, 41 (W1) :W22-W28
[8]   IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies [J].
Lam-Tung Nguyen ;
Schmidt, Heiko A. ;
von Haeseler, Arndt ;
Bui Quang Minh .
MOLECULAR BIOLOGY AND EVOLUTION, 2015, 32 (01) :268-274
[9]   PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses [J].
Lanfear, Robert ;
Frandsen, Paul B. ;
Wright, April M. ;
Senfeld, Tereza ;
Calcott, Brett .
MOLECULAR BIOLOGY AND EVOLUTION, 2017, 34 (03) :772-773
[10]   MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization [J].
Meng, Guanliang ;
Li, Yiyuan ;
Yang, Chentao ;
Liu, Shanlin .
NUCLEIC ACIDS RESEARCH, 2019, 47 (11)