De novo Assembly and Genome-Wide SNP Discovery in Rohu Carp, Labeo rohita

被引：20

作者：

Das, Paramananda ^{[1
]}

Sahoo, Lakshman ^{[1
]}

Das, Sofia P. ^{[1
]}

Bit, Amrita ^{[1
]}

Joshi, Chaitanya G. ^{[2
]}

Kushwaha, Basdeo ^{[3
]}

Kumar, Dinesh ^{[4
]}

Shah, Tejas M. ^{[2
]}

Hinsu, Ankit T. ^{[2
]}

Patel, Namrata ^{[2
]}

Patnaik, Siddhi ^{[1
,6
]}

Agarwal, Suyash ^{[3
]}

Pandey, Manmohan ^{[3
]}

Srivastava, Shreya ^{[3
]}

Meher, Prem Kumar ^{[1
]}

Jayasankar, Pallipuram ^{[1
,7
]}

Koringa, Prakash G. ^{[2
]}

Nagpure, Naresh S. ^{[3
,8
]}

Kumar, Ravindra ^{[3
]}

Singh, Mahender ^{[3
]}

Iquebal, Mir Asif ^{[4
]}

Jaiswal, Sarika ^{[4
]}

Kumar, Neeraj ^{[4
]}

Raza, Mustafa ^{[4
]}

Das Mahapatra, Kanta ^{[1
]}

Jena, Joykrushna ^{[5
]}

机构：

[1] ICAR Cent Inst Freshwater Aquaculture, Fish Genet & Biotechnol Div, Bhubaneswar, India

[2] Anand Agr Univ, Dept Anim Biotechnol, Anand, Gujarat, India

[3] ICAR Natl Bur Fish Genet Resources, Mol Biol & Biotechnol Div, Lucknow, Uttar Pradesh, India

[4] ICAR Indian Agr Stat Res Inst, Ctr Agr Bioinformat, New Delhi, India

[5] Krishi Anusandhan Bhawan II, Div Fisheries, New Delhi, India

[6] Duke NUS Med Sch, Dept Canc & Stem Cell Biol, Singapore, Singapore

[7] ICAR Cent Marine Fisheries Res Inst, Ernakulam, India

[8] ICAR Cent Inst Fisheries Educ, Mumbai, Maharashtra, India

来源：

FRONTIERS IN GENETICS | 2020年 / 11卷

关键词：

rohu carp; draft genome; de novo assembly; orthologous gene family; synteny; phylogenetics; otophysan; INDIAN MAJOR CARP; SSR-MARKERS; SEQUENCE; IDENTIFICATION; ANNOTATION; HAMILTON; FAMILIES; PROGRAM; GENES; TOOL;

D O I：

10.3389/fgene.2020.00386

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

[No abstract available]

引用

页数：7

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