Intrinsic physicochemical profile of marketed antibody-based biotherapeutics

被引:36
作者
Ahmed, Lucky [1 ,2 ]
Gupta, Priyanka [1 ]
Martin, Kyle P. [1 ]
Scheer, Justin M. [1 ,3 ]
Nixon, Andrew E. [1 ]
Kumar, Sandeep [1 ]
机构
[1] Boehringer Ingelheim GmbH & Co KG, Biotherapeut Discovery, Ridgefield, CT 06877 USA
[2] Just Evotec Biol, Mol Design, Seattle, WA 98109 USA
[3] Janssen Pharmaceut Co Johnson & Johnson, Gene Therapy & Gene Delivery Platforms, San Francisco, CA 94080 USA
关键词
biologics; antibody; developability; computation; drug discovery; COMPLEMENTARITY-DETERMINING REGIONS; CONCENTRATION-DEPENDENT VISCOSITY; AGGREGATION-PRONE REGIONS; MONOCLONAL-ANTIBODY; DEVELOPABILITY ASSESSMENT; NONSPECIFIC-BINDING; HYDROPHOBIC MOMENT; RATIONAL DESIGN; PHARMACOKINETICS; SELECTION;
D O I
10.1073/pnas.2020577118
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Feeding biopharma pipelines with biotherapeutic candidates that possess desirable developability profiles can help improve the productivity of biologic drug discovery and development. Here, we have derived an in silico profile by analyzing computed physicochemical descriptors for the variable regions (Fv) found in 77 marketed antibody-based biotherapeutics. Fv regions of these biotherapeutics demonstrate significant diversities in their germlines, complementarity determining region loop lengths, hydrophobicity, and charge distributions. Furthermore, an analysis of 24 physicochemical descriptors, calculated using homology-based molecular models, has yielded five nonredundant descriptors whose distributions represent stability, isoelectric point, and molecular surface characteristics of their Fv regions. Fv regions of candidates from our internal discovery campaigns, human next-generation sequencing repertoires, and those in clinicalstages (CST) were assessed for similarity with the physicochemical profile derived here. The Fv regions in 33% of CST antibodies show physicochemical properties that are dissimilar to currently marketed biotherapeutics. In comparison, physicochemical characteristics of -29% of the Fv regions in human antibodies and -27% of our internal hits deviated significantly from those of marketed biotherapeutics. The early availability of this information can help guide hit selection, lead identification, and optimization of biotherapeutic candidates. Insights from this work can also help support portfolio risk assessment, in-licensing, and biopharma collaborations.
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页数:11
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