In silico studies on therapeutic agents for COVID-19: Drug repurposing approach

被引:266
作者
Shah, Bhumi [1 ,2 ]
Modi, Palmi [1 ]
Sagar, Sneha R. [1 ]
机构
[1] LJ Inst Pharm, SG Highway, Ahmadabad 382210, Gujarat, India
[2] KB Inst Pharmaceut Educ & Res, Gandhinagar 382023, Gujarat, India
关键词
Corona virus; COVID-19; SARS-CoV-2; MERS-CoV; Docking studies; Antiviral drugs; PHARMACOPHORE; DOCKING;
D O I
10.1016/j.lfs.2020.117652
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Aims: The severe acute respiratory syndrome coronavirus 2, better known as COVID-19 has become the current health concern to the entire world. Initially appeared in Wuhan, China around December 2019, it had spread to almost 187 countries due to its high contagious nature. Precautionary measures remain the sole obliging tactic to cease the person to person transmissions till any effective method of treatment or vaccine is developed. Amidst the pandemic, research and development of new molecule is labour-intensive and tedious process. Drug repurposing is the concept of identifying therapeutically potent molecule from the library of pre-existing molecules. Materials and methods: In the present study, 61 molecules that are already being used in clinics or under clinical scrutiny as antiviral agents are surveyed via docking study. Docking study was performed using Maestro interface (Schrodinger Suite, LLC, NY). Key findings: Out of these 61 molecules, 37 molecules were found to interact with > 2 protein structures of COVID-19. The docking results indicate that amongst the reported molecules, HIV protease inhibitors and RNA-dependent RNA polymerase inhibitors showed promising features of binding to COVID-19 enzyme. Along with these, Methisazone an inhibitor of protein synthesis, CGP42112A an angiotensin AT2 receptor agonist and ABT450 an inhibitor of the non-structural protein 3-4A might become convenient treatment option as well against COVID-19. Significance: The drug repurposing approach provide an insight about the therapeutics that might be helpful in treating corona virus disease.
引用
收藏
页数:12
相关论文
共 32 条
[1]  
[Anonymous], TITLE ERROR
[2]   Evidence of the COVID-19 Virus Targeting the CNS: Tissue Distribution, Host-Virus Interaction, and Proposed Neurotropic Mechanisms [J].
Baig, Abdul Mannan ;
Khaleeq, Areeba ;
Ali, Usman ;
Syeda, Hira .
ACS CHEMICAL NEUROSCIENCE, 2020, 11 (07) :995-998
[3]   Identification of potential CRAC channel inhibitors: Pharmacophore mapping, 3D-QSAR modelling, and molecular docking approach [J].
Bhuvaneshwari, S. ;
Sankaranarayanan, K. .
SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2019, 30 (02) :81-108
[4]   Pneumonia of unknown aetiology in Wuhan, China: potential for international spread via commercial air travel [J].
Bogoch, Isaac I. ;
Watts, Alexander ;
Thomas-Bachli, Andrea ;
Huber, Carmen ;
Kraemer, Moritz U. G. ;
Khan, Kamran .
JOURNAL OF TRAVEL MEDICINE, 2020, 27 (02)
[5]  
Bryan-Marrugo O., 2015, Medicina universitaria, V17, P165, DOI DOI 10.1016/J.RMU.2015.05.003
[6]  
Cao B, 2020, NEW ENGL J MED, V382, P1787, DOI [10.1056/NEJMoa2001282, 10.1056/NEJMc2008043]
[7]   Merits and pitfalls of conventional and covalent docking in identifying new hydroxyl aryl aldehyde like compounds as human IRE1 inhibitors [J].
Carlesso, Antonio ;
Chintha, Chetan ;
Gorman, Adrienne M. ;
Samali, Afshin ;
Eriksson, Leif A. .
SCIENTIFIC REPORTS, 2019, 9 (1)
[8]   Remdesivir, lopinavir, emetine, and homoharringtonine inhibit SARS-CoV-2 replication in vitro [J].
Choy, Ka-Tim ;
Wong, Alvina Yin-Lam ;
Kaewpreedee, Prathanporn ;
Sia, Sin Fun ;
Chen, Dongdong ;
Hui, Kenrie Pui Yan ;
Chu, Daniel Ka Wing ;
Chan, Michael Chi Wai ;
Cheung, Peter Pak-Hang ;
Huang, Xuhui ;
Peiris, Malik ;
Yen, Hui-Ling .
ANTIVIRAL RESEARCH, 2020, 178
[9]  
Clercq E, 2016, CLIN MICROBIOL REV, V29, P695, DOI DOI 10.1128/CMR.00102-15
[10]   New insights on the antiviral effects of chloroquine against coronavirus: what to expect for COVID-19? [J].
Devaux, Christian A. ;
Rolain, Jean-Marc ;
Colson, Philippe ;
Raoult, Didier .
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2020, 55 (05)