1H, 13C and 15N chemical shift assignments for the human Pitx2 homeodomain and a R24H homeodomain mutant

被引:4
作者
Doerdelmann, Thomas [1 ]
Kojetin, Douglas J. [1 ]
Baird-Titus, Jamie M. [1 ]
Rance, Mark [1 ]
机构
[1] Univ Cincinnati, Dept Mol Genet Biochem & Microbiol, Cincinnati, OH 45267 USA
关键词
Pitx2; Homeodomain; Axenfeld-Rieger; DNA-binding; NMR; RIEGER-SYNDROME; MOUSE; GENE;
D O I
10.1007/s12104-010-9278-x
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The homeodomain is one of the most important eukaryotic DNA-binding motifs and has been identified in over one thousand proteins. Homeodomain proteins play critical roles in diverse biological processes, including cell differentiation and cell pattern formation. The human Pitx2 homeodomain binds several different DNA sequences and is a pivotal component of both the TGF-beta and Wnt/beta-catenin signaling pathways. As the recognition of specific DNA sequences represents an essential biochemical function of all DNA-binding proteins, we have chosen the Pitx2 homeodomain model to investigate the mechanisms that convey biological specificity in these protein-DNA interactions. Here, we report complete chemical shift assignments of the human Pitx2 homeodomain and the R24H mutation that induces ring dermoid of the cornea syndrome.
引用
收藏
页码:105 / 107
页数:3
相关论文
共 10 条
[1]   The Homeodomain Resource: 2003 update [J].
Banerjee-Basu, S ;
Moreland, T ;
Hsu, BJ ;
Trout, KL ;
Baxevanis, AD .
NUCLEIC ACIDS RESEARCH, 2003, 31 (01) :304-306
[2]   Solution structure of the k50 class homeodomain PITX2 bound to DNA and implications for mutations that cause Rieger syndrome [J].
Chaney, BA ;
Clark-Baldwin, K ;
Dave, V ;
Ma, J ;
Rance, M .
BIOCHEMISTRY, 2005, 44 (20) :7497-7511
[3]   NMRPIPE - A MULTIDIMENSIONAL SPECTRAL PROCESSING SYSTEM BASED ON UNIX PIPES [J].
DELAGLIO, F ;
GRZESIEK, S ;
VUISTER, GW ;
ZHU, G ;
PFEIFER, J ;
BAX, A .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (03) :277-293
[4]  
Johnson Bruce A, 2004, Methods Mol Biol, V278, P313
[5]  
Kitamura K, 1999, DEVELOPMENT, V126, P5749
[6]   Identification of a dominant negative homeodomain mutation in Rieger syndrome [J].
Saadi, I ;
Semina, EV ;
Amendt, BA ;
Harris, DJ ;
Murphy, KP ;
Murray, JC ;
Russo, AF .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (25) :23034-23041
[7]   Cloning and characterization of a novel bicoid-related homeobox transcription factor gene, RIEG, involved in Rieger syndrome [J].
Semina, EV ;
Reiter, R ;
Leysens, NJ ;
Alward, WLM ;
Small, KW ;
Datson, NA ;
SiegelBartelt, J ;
BierkeNelson, D ;
Bitoun, P ;
Zabel, BU ;
Carey, JC ;
Murray, JC .
NATURE GENETICS, 1996, 14 (04) :392-399
[8]   A gene atlas of the mouse and human protein-encoding transcriptomes [J].
Su, AI ;
Wiltshire, T ;
Batalov, S ;
Lapp, H ;
Ching, KA ;
Block, D ;
Zhang, J ;
Soden, R ;
Hayakawa, M ;
Kreiman, G ;
Cooke, MP ;
Walker, JR ;
Hogenesch, JB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (16) :6062-6067
[9]   H-1, C-13 AND N-15 CHEMICAL-SHIFT REFERENCING IN BIOMOLECULAR NMR [J].
WISHART, DS ;
BIGAM, CG ;
YAO, J ;
ABILDGAARD, F ;
DYSON, HJ ;
OLDFIELD, E ;
MARKLEY, JL ;
SYKES, BD .
JOURNAL OF BIOMOLECULAR NMR, 1995, 6 (02) :135-140
[10]   Mutation in PITX2 is associated with ring dermoid of the cornea -: art. no. e129 [J].
Xia, K ;
Wu, L ;
Liu, X ;
Xi, X ;
Liang, D ;
Zheng, D ;
Cai, F ;
Pan, Q ;
Long, Z ;
Dai, H ;
Hu, Z ;
Tang, B ;
Zhang, Z ;
Xia, J .
JOURNAL OF MEDICAL GENETICS, 2004, 41 (12) :e129