Development of a loop-mediated isothermal amplification assay for rapid and sensitive detection of ostreid herpesvirus 1 DNA
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作者:
Ren, Weicheng
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Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R ChinaChinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
Ren, Weicheng
[1
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Renault, Tristan
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Ifremer, Lab Genet & Pathol, F-17390 La Tremblade, FranceChinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
Renault, Tristan
[2
]
Cai, Yuyong
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Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
Ocean Univ China, Dept Aquaculture, Qingdao 266003, Shandong, Peoples R ChinaChinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
Cai, Yuyong
[1
,3
]
Wang, Chongming
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Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R ChinaChinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
Wang, Chongming
[1
]
机构:
[1] Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Shandong, Peoples R China
[2] Ifremer, Lab Genet & Pathol, F-17390 La Tremblade, France
[3] Ocean Univ China, Dept Aquaculture, Qingdao 266003, Shandong, Peoples R China
A loop-mediated isothermal amplification (LAMP) assay was developed for rapid, specific and sensitive detection of ostreid herpesvirus 1 (OsHV-1) DNA. A set of four primers was designed, based on the sequence of the ATPase subunit of the OsHV-1 DNA-packaging terminase gene. The reaction temperature and time were optimized to 64 degrees C and 60 min, respectively. LAMP products were detected by agarose gel electrophoresis or by visual inspection of a color change due to addition of fluorescent dye. The developed method was highly specific for detection of OsHV-1, and no cross-reaction was observed with other DNA viruses, such as White spot syndrome virus (WSSV), Penaeus stylirostris densovirus (PstDNV). Turbot reddish body iridovirus (TRBIV) and Lymphocystis disease virus (LCDV) found commonly in China. The lower detection limit of the LAMP assay was approximately 20 copies per reaction, and it was 100 times more sensitive than that of conventional PCR. A comparative evaluation of 10 oyster samples using LAMP and PCR assays showed overall correlation in positive and negative results for OsHV-1. These results indicate that the LAMP assay is a simple, rapid, sensitive, specific and reliable technique for the detection of OsHV-1. The LAMP technique has capacity for use for the detection of OsHV-1 both in the laboratory and on farms. Crown Copyright (C) 2010 Published by Elsevier B.V. All rights reserved.
机构:
So Med Univ, Sch Publ Hlth & Trop Med, Guangzhou 510515, Guangdong, Peoples R ChinaSo Med Univ, So Hosp, Guangzhou 510515, Guangdong, Peoples R China
Fan, Hongying
Long, Beiguo
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So Med Univ, Sch Publ Hlth & Trop Med, Guangzhou 510515, Guangdong, Peoples R ChinaSo Med Univ, So Hosp, Guangzhou 510515, Guangdong, Peoples R China
Long, Beiguo
Wu, Xianbo
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So Med Univ, Sch Publ Hlth & Trop Med, Guangzhou 510515, Guangdong, Peoples R ChinaSo Med Univ, So Hosp, Guangzhou 510515, Guangdong, Peoples R China
Wu, Xianbo
Bai, Yang
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So Med Univ, So Hosp, Guangzhou 510515, Guangdong, Peoples R ChinaSo Med Univ, So Hosp, Guangzhou 510515, Guangdong, Peoples R China
机构:
Osaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan
Yamazaki, Wataru
Taguchi, Masumi
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Osaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan
Taguchi, Masumi
Ishibashi, Masanori
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Osaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan
Ishibashi, Masanori
Nukina, Masafumi
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机构:
Kobe Inst Hlth, Dept Microbiol, Kobe, Hyogo, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan
Nukina, Masafumi
Misawa, Naoaki
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Miyazaki Univ, Fac Agr, Dept Vet Publ Hlth, Miyazaki 88921, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan
Misawa, Naoaki
Inoue, Kiyoshi
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Osaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, JapanOsaka Prefectural Inst Publ Hlth, Div Bacteriol, Higashinari Ku, Osaka 5370025, Japan