Transposable elements as agents of rapid adaptation may explain the genetic paradox of invasive species

被引:154
作者
Stapley, Jessica [1 ]
Santure, Anna W. [2 ]
Dennis, Stuart R. [1 ]
机构
[1] Univ Sheffield, Dept Anim & Plant Sci, Sheffield S10 2TN, S Yorkshire, England
[2] Univ Auckland, Auckland Mail Ctr, Auckland 1142, New Zealand
关键词
evolutionary genetics; genomics; introduced species; loci of adaptation; mobile elements; naturalized species; nonfunctional DNA; COPY NUMBER VARIATION; ADAPTIVE EVOLUTION; POPULATION GENOMICS; PHENOTYPIC PLASTICITY; NATURAL-POPULATIONS; RECOMBINATION RATE; RANGE EXPANSION; LIFE-HISTORY; DROSOPHILA; SELECTION;
D O I
10.1111/mec.13089
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Rapid adaptation of invasive species to novel habitats has puzzled evolutionary biologists for decades, especially as this often occurs in the face of limited genetic variability. Although some ecological traits common to invasive species have been identified, little is known about the possible genomic/genetic mechanisms that may underlie their success. A common scenario in many introductions is that small founder population sizes will often lead to reduced genetic diversity, but that invading populations experience large environmental perturbations, such as changes in habitat and environmental stress. Although sudden and intense stress is usually considered in a negative context, these perturbations may actually facilitate rapid adaptation by affecting genome structure, organization and function via interactions with transposable elements (TEs), especially in populations with low genetic diversity. Stress-induced changes in TE activity can alter gene action and can promote structural variation that may facilitate the rapid adaptation observed in new environments. We focus here on the adaptive potential of TEs in relation to invasive species and highlight their role as powerful mutational forces that can rapidly create genetic diversity. We hypothesize that activity of transposable elements can explain rapid adaptation despite low genetic variation (the genetic paradox of invasive species), and provide a framework under which thishypothesis can be tested using recently developed and emerging genomic technologies.
引用
收藏
页码:2241 / 2252
页数:12
相关论文
共 124 条
  • [41] Advances in plant genome sequencing
    Hamilton, John P.
    Buell, C. Robin
    [J]. PLANT JOURNAL, 2012, 70 (01) : 177 - 190
  • [42] Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
    Hangauer, Matthew J.
    Vaughn, Ian W.
    McManus, Michael T.
    [J]. PLOS GENETICS, 2013, 9 (06):
  • [43] Nonadditive changes to cytosine methylation as a consequence of hybridization and genome duplication in Senecio (Asteraceae)
    Hegarty, Matthew J.
    Batstone, Tom
    Barker, Gary L.
    Edwards, Keith J.
    Abbott, Richard J.
    Hiscock, Simon J.
    [J]. MOLECULAR ECOLOGY, 2011, 20 (01) : 105 - 113
  • [44] Soft sweeps: Molecular population genetics of adaptation from standing genetic variation
    Hermisson, J
    Pennings, PS
    [J]. GENETICS, 2005, 169 (04) : 2335 - 2352
  • [45] Assembly and comparative analysis of transposable elements from low coverage genomic sequence data in Asparagales
    Hertweck, Kate L.
    [J]. GENOME, 2013, 56 (09) : 487 - 494
  • [46] ESTIMATION OF EFFECTIVE POPULATION-SIZE FROM DATA ON LINKAGE DISEQUILIBRIUM
    HILL, WG
    [J]. GENETICS RESEARCH, 1981, 38 (03) : 209 - 216
  • [47] Tapping the Promise of Genomics in Species with Complex, Nonmodel Genomes
    Hirsch, Candice N.
    Buell, C. Robin
    [J]. ANNUAL REVIEW OF PLANT BIOLOGY, VOL 64, 2013, 64 : 89 - 110
  • [48] Genome-wide association studies for common diseases and complex traits
    Hirschhorn, JN
    Daly, MJ
    [J]. NATURE REVIEWS GENETICS, 2005, 6 (02) : 95 - 108
  • [49] Comparative genomics in the Asteraceae reveals little evidence for parallel evolutionary change in invasive taxa
    Hodgins, Kathryn A.
    Bock, Dan G.
    Hahn, Min A.
    Heredia, Sylvia M.
    Turner, Kathryn G.
    Rieseberg, Loren H.
    [J]. MOLECULAR ECOLOGY, 2015, 24 (09) : 2226 - 2240
  • [50] Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing
    Hohenlohe, Paul A.
    Day, Mitch D.
    Amish, Stephen J.
    Miller, Michael R.
    Kamps-Hughes, Nick
    Boyer, Matthew C.
    Muhlfeld, Clint C.
    Allendorf, Fred W.
    Johnson, Eric A.
    Luikart, Gordon
    [J]. MOLECULAR ECOLOGY, 2013, 22 (11) : 3002 - 3013