Integrative physical oncology

被引:19
作者
Hatzikirou, Haralampos [1 ]
Chauviere, Arnaud [1 ,3 ]
Bauer, Amy L. [2 ]
Leier, Andre [3 ,4 ]
Lewis, Michael T. [5 ,6 ]
Macklin, Paul [7 ,8 ]
Marquez-Lago, Tatiana T. [3 ,4 ]
Bearer, Elaine L. [1 ]
Cristini, Vittorio [1 ,3 ,9 ]
机构
[1] Univ New Mexico, Dept Pathol, Albuquerque, NM 87131 USA
[2] Los Alamos Natl Lab, Los Alamos, NM USA
[3] Univ New Mexico, STMC, Albuquerque, NM 87131 USA
[4] Okinawa Inst Sci & Technol, Onna, Okinawa, Japan
[5] Baylor Coll Med, Dept Mol & Cellular Biol, Lester & Sue Smith Breast Ctr, Houston, TX 77030 USA
[6] Baylor Coll Med, Dept Radiol, Lester & Sue Smith Breast Ctr, Houston, TX 77030 USA
[7] Univ Dundee, Div Math, Dundee, Scotland
[8] Univ So Calif, Keck Sch Med, Ctr Appl Mol Med, Los Angeles, CA 90033 USA
[9] Univ New Mexico, Dept Chem & Biomed Engn, Albuquerque, NM 87131 USA
基金
美国国家科学基金会;
关键词
CARCINOMA IN-SITU; SOLID TUMOR-GROWTH; EXTRACELLULAR-MATRIX; SIGNALING NETWORK; MULTISCALE MODEL; EPITHELIAL ACINI; CANCER; CELL; SIMULATION; MICROENVIRONMENT;
D O I
10.1002/wsbm.158
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Cancer is arguably the ultimate complex biological system. Solid tumors are microstructured soft matter that evolves as a consequence of spatio-temporal events at the intracellular (e.g., signaling pathways, macromolecular trafficking), intercellular (e.g., cellcell adhesion/communication), and tissue (e.g., cellextracellular matrix interactions, mechanical forces) scales. To gain insight, tumor and developmental biologists have gathered a wealth of molecular, cellular, and genetic data, including immunohistochemical measurements of cell type-specific division and death rates, lineage tracing, and gain-of-function/loss-of-function mutational analyses. These data are empirically extrapolated to a diagnosis/prognosis of tissue-scale behavior, e.g., for clinical decision. Integrative physical oncology (IPO) is the science that develops physically consistent mathematical approaches to address the significant challenge of bridging the nano (nm)micro (mu m) to macro (mm, cm) scales with respect to tumor development and progression. In the current literature, such approaches are referred to as multiscale modeling. In the present article, we attempt to assess recent modeling approaches on each separate scale and critically evaluate the current hybrid-multiscale models used to investigate tumor growth in the context of brain and breast cancers. Finally, we provide our perspective on the further development and the impact of IPO. WIREs Syst Biol Med 2012, 4:114. doi: 10.1002/wsbm.158
引用
收藏
页码:1 / 14
页数:14
相关论文
共 91 条
[1]   Ductal carcinoma in situ and the emergence of diversity during breast cancer evolution [J].
Allred, D. Craig ;
Wu, Yun ;
Mao, Sufeng ;
Nagtegaal, Iris D. ;
Lee, Sangjun ;
Perou, Charles M. ;
Mohsin, Syed K. ;
O'Connell, Peter ;
Tsimelzon, Anna ;
Medina, Dan .
CLINICAL CANCER RESEARCH, 2008, 14 (02) :370-378
[2]   Cell adhesion mechanisms and stress relaxation in the mechanics of tumours [J].
Ambrosi, Davide ;
Preziosi, Luigi .
BIOMECHANICS AND MODELING IN MECHANOBIOLOGY, 2009, 8 (05) :397-413
[3]   Detailed Simulations of Cell Biology with Smoldyn 2.1 [J].
Andrews, Steven S. ;
Addy, Nathan J. ;
Brent, Roger ;
Arkin, Adam P. .
PLOS COMPUTATIONAL BIOLOGY, 2010, 6 (03)
[4]  
[Anonymous], 2010, Multiscale Modeling of Cancer: An Integrated Experimental and Mathematical Modeling Approach
[5]  
[Anonymous], 2007, Comput. Math. Methods Med., DOI DOI 10.1080/17486700701303143
[6]   A history of the study of solid tumour growth: The contribution of mathematical modelling [J].
Araujo, RP ;
McElwain, DLS .
BULLETIN OF MATHEMATICAL BIOLOGY, 2004, 66 (05) :1039-1091
[7]   Epigenetic Gene Regulation in Cancer [J].
Ballestar, Esteban ;
Esteller, Manel .
LONG-RANGE CONTROL OF GENE EXPRESSION, 2008, 61 :247-267
[8]   Cellular automaton simulation examining progenitor hierarchy structure effects on mammary ductal carcinoma in situ [J].
Bankhead, Armand, III ;
Magnuson, Nancy S. ;
Heckendorn, Robert B. .
JOURNAL OF THEORETICAL BIOLOGY, 2007, 246 (03) :491-498
[9]  
BAUER AL, 2007, THESIS U MICHIGAN AN
[10]   A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis [J].
Bauer, Amy L. ;
Jackson, Trachette L. ;
Jiang, Yi .
BIOPHYSICAL JOURNAL, 2007, 92 (09) :3105-3121