Quantitative Photo Activated Localization Microscopy: Unraveling the Effects of Photoblinking

被引:200
作者
Annibale, Paolo [1 ]
Vanni, Stefano [2 ]
Scarselli, Marco [1 ]
Rothlisberger, Ursula [2 ]
Radenovic, Aleksandra [1 ]
机构
[1] Ecole Polytech Fed Lausanne, Inst Bioengn, Lab Nanoscale Biol, Lausanne, Switzerland
[2] Ecole Polytech Fed Lausanne, Lab Computat Chem & Biochem, Inst Chem Sci & Engn, Lausanne, Switzerland
来源
PLOS ONE | 2011年 / 6卷 / 07期
基金
瑞士国家科学基金会;
关键词
SINGLE MOLECULES; DYE MOLECULES; SUPERRESOLUTION; PROTEINS; DYNAMICS; COLOCALIZATION; KINETICS; BLINKING; LIMIT; GFP;
D O I
10.1371/journal.pone.0022678
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In this work we discuss how to use photophysical information for improved quantitative measurements using Photo Activated Localization Microscopy (PALM) imaging. We introduce a method that reliably estimates the number of photoblinking molecules present in a biological sample and gives a robust way to quantify proteins at the single-cell level from PALM images. We apply this method to determine the amount of beta 2 adrenergic receptor, a prototypical G Protein Coupled Receptor, expressed on the plasma membrane of HeLa cells.
引用
收藏
页数:8
相关论文
共 37 条
  • [1] Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting
    Ando, R
    Mizuno, H
    Miyawaki, A
    [J]. SCIENCE, 2004, 306 (5700) : 1370 - 1373
  • [2] Photoactivatable Fluorescent Protein mEos2 Displays Repeated Photoactivation after a Long-Lived Dark State in the Red Photoconverted Form
    Annibale, P.
    Scarselli, M.
    Kodiyan, A.
    Radenovic, A.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2010, 1 (09): : 1506 - 1510
  • [3] Identification of clustering artifacts in photoactivated localization microscopy
    Annibale, Paolo
    Vanni, Stefano
    Scarselli, Marco
    Rothlisberger, Ursula
    Radenovic, Aleksandra
    [J]. NATURE METHODS, 2011, 8 (07) : 527 - 528
  • [4] Optical single-channel resolution imaging of the ryanodine receptor distribution in rat cardiac myocytes
    Baddeley, David
    Jayasinghe, Isuru D.
    Lam, Leo
    Rossberger, Sabrina
    Cannell, Mark B.
    Soeller, Christian
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (52) : 22275 - 22280
  • [5] Imaging intracellular fluorescent proteins at nanometer resolution
    Betzig, Eric
    Patterson, George H.
    Sougrat, Rachid
    Lindwasser, O. Wolf
    Olenych, Scott
    Bonifacino, Juan S.
    Davidson, Michael W.
    Lippincott-Schwartz, Jennifer
    Hess, Harald F.
    [J]. SCIENCE, 2006, 313 (5793) : 1642 - 1645
  • [6] BJORN F, 2010, NATURE IMMUNOLOGY, V11, P6
  • [7] High-precision distance measurements and volume-conserving segmentation of objects near and below the resolution limit in three-dimensional confocal fluorescence microscopy
    Bornfleth, H
    Sätzler, K
    Eils, R
    Cremer, C
    [J]. JOURNAL OF MICROSCOPY-OXFORD, 1998, 189 : 118 - 136
  • [8] STRATEGIES FOR ATTAINING SUPERRESOLUTION USING SPECTROSCOPIC DATA AS CONSTRAINTS
    BURNS, DH
    CALLIS, JB
    CHRISTIAN, GD
    DAVIDSON, ER
    [J]. APPLIED OPTICS, 1985, 24 (02): : 154 - 161
  • [9] Stochastic protein expression in individual cells at the single molecule level
    Cai, L
    Friedman, N
    Xie, XS
    [J]. NATURE, 2006, 440 (7082) : 358 - 362
  • [10] On/off blinking and switching behaviour of single molecules of green fluorescent protein
    Dickson, RM
    Cubitt, AB
    Tsien, RY
    Moerner, WE
    [J]. NATURE, 1997, 388 (6640) : 355 - 358