DNA Barcoding of Two Thymelaeaceae Species: Daphne mucronata Royle and Thymelaea hirsuta (L.) Endl

被引:6
作者
Alkaraki, Almuthanna K. [1 ]
Aldmoor, Maisam A. [1 ]
Lahham, Jamil N. [1 ]
Awad, Mohammed [2 ]
机构
[1] Yarmouk Univ, Dept Biol Sci, Fac Sci, Irbid 21163, Jordan
[2] Al Azhar Univ, Fac Agr, Dept Biotechnol, Cairo 11651, Egypt
来源
PLANTS-BASEL | 2021年 / 10卷 / 10期
关键词
DNA barcoding; Thymelaeaceae family; Daphne mucronata; Thymelaea hirsuta; matK; rbcL; rpoC1; ANTIOXIDANT;
D O I
10.3390/plants10102199
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Daphne mucronata Royle and Thymelaea hirsuta (L.) Endl both belong to the Thymelaeaceae family. Both species are used traditionally to treat several diseases along with various daily applications by Jordanian Bedouins. Traditionally, those species are identified through personal proficiency, which could be misleading due to human errors or lack of expertise. This study aims to investigate an effective DNA barcoding method to identify and characterize Daphne mucronata Royle and Thymelaea hirsuta plant species at the molecular level. Daphne mucronata Royle and Thymelaea hirsuta were collected from the ancient city of Petra in the Southern part of Jordan. Sequences of candidate DNA barcodes were amplified (rbcL, matK, and rpoC1), sequenced, and aligned to the blastn database. Moreover, the obtained sequences were compared with available sequences of related species at the GenBank database. Our results showed that DNA barcoding successfully identifies the two plant species using any of chloroplast genes (rbcL, matK, or rpoC1). The results emphasize the ability of DNA barcoding for identifying and characterizing different plant species through the recruitment of different barcode loci in molecular identification.</p>
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页数:10
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共 50 条
[1]   Antioxidant and antitumor activities of Artemisia campestris and Thymelaea hirsuta from southern Tunisia [J].
Akrout, Ahmed ;
Alarcon Gonzalez, Lidia ;
El Jani, Hajer ;
Campra Madrid, Pablo .
FOOD AND CHEMICAL TOXICOLOGY, 2011, 49 (02) :342-347
[2]  
Al-Snafi AE, 2017, INDO AM J PHARM SCI, V4, P235, DOI 10.5281/zenodo.344927
[3]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[4]  
Amari N. O., 2014, Asian Pacific Journal of Tropical Disease, V4, P104
[5]   Antifungal and Antiaging Evaluation of Aerial Part Extracts of Thymelaea hirsuta (L.) Endl [J].
Amari, Nesrine Ouda ;
Razafimandimby, Bienvenue ;
Auberon, Florence ;
Azoulay, Stephane ;
Fernandez, Xavier ;
Berkani, Abdellah ;
Bouchara, Jean-Philippe ;
Landreau, Anne .
NATURAL PRODUCT COMMUNICATIONS, 2021, 16 (02)
[6]  
Amir G.Z, 2001, IRAN J MED SCI, V26, P146
[7]  
[Anonymous], 2013, GenBank
[8]  
[Anonymous], 2006, FINCHTV 1 4 0
[9]  
[Anonymous], EFLORA
[10]   Chemical composition, antioxidant and antimicrobial potential of essential oils from different parts of Daphne mucronata Royle [J].
Ashraf, Iqra ;
Zubair, Muhammad ;
Rizwan, Komal ;
Rasool, Nasir ;
Jamil, Muhammad ;
Khan, Shakeel Ahmad ;
Tareen, Rasool Bakhsh ;
Ahmad, Viqar Uddin ;
Mahmood, Abid ;
Riaz, Muhammad ;
Zia-Ul-Haq, M. ;
Jaafar, Hawa Z. E. .
CHEMISTRY CENTRAL JOURNAL, 2018, 12