Crystallization, X-ray diffraction analysis and phasing of carboxylesterase PA3859 from Pseudomonas aeruginosa

被引:9
作者
Pesaresi, A
Lamba, D
机构
[1] Sincrotrone Trieste SCpA, Struct Biol Lab, I-34012 Trieste, Italy
[2] Scuola Int Super Studi Avanzati, I-34014 Trieste, Italy
[3] Int Ctr Genet Engn & Biotechnol, Prot Struct & Bioinformat Grp, I-34012 Trieste, Italy
[4] CNR, Ist Cristallog, I-34012 Trieste, Italy
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2005年 / 1752卷 / 02期
关键词
Pseudomonas aeruginosa; carboxylesterase; alpha/beta hydrolase; crystallization; X-ray crystal structure;
D O I
10.1016/j.bbapap.2005.06.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have recently purified an intracellular carboxylesterase encoded by the open reading frame PA3859 of Pseudomonas aeruginosa. Among proteins showing a significant sequence homology with PA3859 the in vivo function is only known for the human acyl-protein thioesterase I that is involved in the deacylation of G alpha proteins. The crystal structure determination of P aeruginosa carboxylesterase is expected to provide insights into its physiological role. Therefore, the PA3859 gene was cloned and heterologously expressed in Escherichia coli as N-terminally 6xHis tagged recombinant protein. Here, we present the crystallization, X-ray diffraction analysis and phasing of this enzyme. Two crystal forms were obtained by the hanging drop vapor diffusion method. Crystals of form I belong to the space group P2(1) with cell dimensions of a=65.65, b=50.55, c 142.55 angstrom, beta=92.9 degrees and diffracted, upon flash annealing, up to a resolution of 2.9 angstrom. Two dimers are present in the asymmetric unit. Crystals of form II belong to space group P2(1)2(1)2, with unit cell dimensions of a-96.42, b=96.36, c=68.04 angstrom and diffracted up to 2.1 angstrom resolution. One dimer is present in the asymmetric unit. (C) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:197 / 201
页数:5
相关论文
共 50 条
  • [31] Crystallization and preliminary X-ray diffraction studies of human procathepsin L
    Coulombe, R
    Li, YG
    Takebe, S
    Menard, R
    Mason, P
    Mort, JS
    Cygler, M
    PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1996, 25 (03): : 398 - 400
  • [32] Powder X-ray diffraction method for the quantification of cocrystals in the crystallization mixture
    Padrela, Luis
    de Azevedo, Edmundo Gomes
    Velaga, Sitaram P.
    DRUG DEVELOPMENT AND INDUSTRIAL PHARMACY, 2012, 38 (08) : 923 - 929
  • [33] Crystallization and preliminary X-ray diffraction analysis of a recombinant bacterial heme oxygenase (Hmu O) from Corynebacterium diphtheriae
    Chu, GC
    Park, SY
    Shiro, Y
    Yoshida, T
    Ikeda-Saito, M
    JOURNAL OF STRUCTURAL BIOLOGY, 1999, 126 (02) : 171 - 174
  • [34] Vinorine synthase from Rauvolfia:: the first example of crystallization and preliminary X-ray diffraction analysis of an enzyme of the BAHD superfamily
    Ma, XY
    Koepke, J
    Bayer, A
    Linhard, V
    Fritzsch, G
    Zhang, B
    Michel, H
    Stöckigt, J
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, 2004, 1701 (1-2): : 129 - 132
  • [35] Expression, purification, crystallization and preliminary crystallographic analysis of PA3885 (TpbA) from Pseudomonas aeruginosa PAO1
    Yang, Wen
    Li, Kan
    Bai, Yuwei
    Zhou, Ruimin
    Zhou, Weihong
    Bartlam, Mark
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2010, 66 : 1473 - 1476
  • [36] Crystallization and X-ray analysis of monodisperse human properdin
    Pedersen, Dennis Vestergaard
    Revel, Margot
    Gadeberg, Trine Amalie Fogh
    Andersen, Gregers Rom
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2019, 75
  • [37] Thermal analysis and high-temperature X-ray diffraction of nano-tricalcium phosphate crystallization
    Bucur, Alexandra Ioana
    Bucur, Raul
    Vlase, Titus
    Doca, Nicolae
    JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY, 2012, 107 (01) : 249 - 255
  • [38] Crystallization and preliminary X-ray diffraction analysis of FKBP12 complexed with a novel neurotrophic ligand
    Li, PY
    Wang, LW
    Ding, Y
    Wu, BL
    Shu, CL
    Nie, AH
    Li, S
    Shen, BF
    Rao, ZH
    PROTEIN AND PEPTIDE LETTERS, 2002, 9 (05) : 459 - 463
  • [39] Thermal analysis and high-temperature X-ray diffraction of nano-tricalcium phosphate crystallization
    Alexandra Ioana Bucur
    Raul Bucur
    Titus Vlase
    Nicolae Doca
    Journal of Thermal Analysis and Calorimetry, 2012, 107 : 249 - 255
  • [40] Crystallization and preliminary X-ray diffraction analysis of FKBP12 complexed with a new neurotrophic ligand
    LI Pengyun 1
    2. Beijing Institute of Pharmacology and Toxicology
    3. Beijing Institute of Basic Medical Science
    Progress in Natural Science, 2003, (10) : 45 - 47