Rational design-based engineering of a thermostable phytase by site-directed mutagenesis

被引:16
作者
Fakhravar, Azita [1 ]
Hesampour, Ardeshir [1 ]
机构
[1] Islamic Azad Univ, Dept Biol, Cent Tehran Branch, POB 14676-86831, Tehran, Iran
关键词
Phytase; Thermostability; Molecular dynamics; Enzyme engineering; ESCHERICHIA-COLI PHYTASE; NIGER PHYA PHYTASE; THERMAL-STABILITY; DEGRADATION; SEQUENCE; FEED;
D O I
10.1007/s11033-018-4362-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Phytases are enzymes that hydrolysis phytic acid and makes mineral phosphorus available to animals. Phytases face relatively extreme heating during food processing, thus thermostability plays an important role in industrial applicability of this enzyme. Herein, we report the design of a thermostable phytase with favorable biochemical properties and high enzymatic activity using molecular dynamics and rational design-based molecular engineering. Based on the crystal structure of E. coli phytase, bioinformatics analysis and docking binding energy measurement, S392F mutant was introduced by site-directed mutagenesis in order to improve thermostability of phytase through strengthen the bounding interactions. Wilde type and Mutated constructs were expressed in E. coli BL 21. The WT and manipulated phytase were purified; their biochemical and kinetic was investigated. Results revealed that recombinant WT and mutant phytase have optimum temperature of 50 A degrees C with no significance change but optimum pH of WT and mutant was respectively 5 and 6 with a pH shift. Furthermore, S392F phytase catalytic efficiency values showed significant improve of 25.6%, compared with the WT. Analysis of the retained enzymatic activity at high temperatures, indicated that despite of phytase stability reduction at high temperatures but mutant phytase showed more stable behavior in compare with WT phytase, So that at 70 A degrees C showed twice thermo stability and at 80 A degrees C and 90 A degrees C display respectively 74% and 78.4% improvement of thermostability compared to the wild-type. In conclusion, our results implied that the designed phytase could be a potential candidate for phytase manipulation research and industrial applications with improved thermostability.
引用
收藏
页码:2053 / 2061
页数:9
相关论文
共 34 条
[1]   Current research and future perspectives of phytase bioprocessing [J].
Bhavsar, K. ;
Khire, J. M. .
RSC ADVANCES, 2014, 4 (51) :26677-26691
[2]   Phytate: impact on environment and human nutrition. A challenge for molecular breeding [J].
Bohn, Lisbeth ;
Meyer, Anne S. ;
Rasmussen, Soren K. .
JOURNAL OF ZHEJIANG UNIVERSITY-SCIENCE B, 2008, 9 (03) :165-191
[3]   Computational tools for designing and engineering enzymes [J].
Damborsky, Jiri ;
Brezovsky, Jan .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2014, 19 :8-16
[4]   In vitro and in vivo characteristics of bacterial phytases and their efficacy in broiler chickens [J].
Elkhalil, E. A. I. ;
Maenner, K. ;
Borriss, R. ;
Simon, O. .
BRITISH POULTRY SCIENCE, 2007, 48 (01) :64-70
[5]   AppA C-terminal Plays an Important Role in its Thermostability in Escherichia coli [J].
Fei, Baojin ;
Cao, Yu ;
Xu, Hui ;
Li, Xinran ;
Song, Tao ;
Fei, Zhongan ;
Qiao, Dairong ;
Cao, Yi .
CURRENT MICROBIOLOGY, 2013, 66 (04) :374-378
[6]   myo-inositol phosphate isomers generated by the action of a phytase from a malaysian waste-water bacterium [J].
Greiner, Ralf ;
Farouk, Abd-Elaziem ;
Carlsson, Nils-Gunnar ;
Konietzny, Ursula .
PROTEIN JOURNAL, 2007, 26 (08) :577-584
[7]   Myo-inositol hexakisphosphate degradation by Bifidobacterium infantis ATCC 15697 [J].
Haros, Monica ;
Bielecka, Maria ;
Honke, Joanna ;
Sanz, Yolanda .
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2007, 117 (01) :76-84
[8]   STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins [J].
Heinig, M ;
Frishman, D .
NUCLEIC ACIDS RESEARCH, 2004, 32 :W500-W502
[9]  
Hesampour A, 2014, PROG BIOL SCI, V4, P97, DOI 10.22059/pbs.2014.50309
[10]   Enhancement of Thermostability and Kinetic Efficiency of Aspergillus niger PhyA Phytase by Site-Directed Mutagenesis [J].
Hesampour, Ardeshir ;
Siadat, Seyed Ehsan Ranaei ;
Malboobi, Mohammad Ali ;
Mohandesi, Nooshin ;
Arab, Seyed Shahriar ;
Ghahremanpour, Mohammad Mehdi .
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY, 2015, 175 (05) :2528-2541