Multiscale network modeling of oligodendrocytes reveals molecular components of myelin dysregulation in Alzheimer's disease

被引:80
作者
McKenzie, Andrew T. [1 ,2 ,3 ]
Moyon, Sarah [4 ,5 ,14 ]
Wang, Minghui [1 ,2 ]
Katsyv, Igor [1 ,2 ,3 ]
Song, Won-Min [1 ,2 ]
Zhou, Xianxiao [1 ,2 ]
Dammer, Eric B. [6 ]
Duong, Duc M. [7 ,8 ]
Aaker, Joshua [9 ]
Zhao, Yongzhong [1 ,2 ]
Beckmann, Noam [1 ,2 ]
Wang, Pei [1 ,2 ]
Zhu, Jun [1 ,2 ]
Lah, James J. [10 ,11 ]
Seyfried, Nicholas T. [7 ,8 ,10 ]
Levey, Allan I. [10 ,11 ]
Katsel, Pavel [12 ]
Haroutunian, Vahram [2 ,12 ,13 ]
Schadt, Eric E. [1 ,2 ]
Popko, Brian [9 ]
Casaccia, Patrizia [2 ,4 ,5 ,14 ]
Zhang, Bin [1 ,2 ]
机构
[1] Icahn Sch Med Mt Sinai, Dept Genet & Genom Sci, One Gustave L Levy Pl,1470 Madison Ave, New York, NY 10029 USA
[2] Icahn Sch Med Mt Sinai, Icahn Inst Genom & Multiscale Biol, One Gustave L Levy Pl, New York, NY 10029 USA
[3] Icahn Sch Med Mt Sinai, Med Scientist Training Program, One Gustave L Levy Pl, New York, NY 10029 USA
[4] Icahn Sch Med Mt Sinai, Fishberg Dept Neurosci, One Gustave L Levy Pl, New York, NY 10029 USA
[5] Icahn Sch Med Mt Sinai, Friedman Brain Inst, One Gustave L Levy Pl, New York, NY 10029 USA
[6] Emory Univ, Dept Human Genet, Sch Med, Atlanta, GA 30322 USA
[7] Emory Univ, Sch Med, Dept Biochem, Atlanta, GA 30322 USA
[8] Emory Univ, Sch Med, Integrated Prote Core Facil, Atlanta, GA 30322 USA
[9] Univ Chicago, Pritzker Sch Med, Dept Neurol, 5841 S Maryland Ave, Chicago, IL 60637 USA
[10] Emory Univ, Sch Med, Dept Neurol, Atlanta, GA 30322 USA
[11] Emory Univ, Sch Med, Ctr Neurodegenerat Disorders, Atlanta, GA 30322 USA
[12] Icahn Sch Med Mt Sinai, Dept Psychiat, New York, NY 10029 USA
[13] James J Peters VA Med Ctr, Mental Illness Res Educ & Clin Ctr VISN 3, Bronx, NY 10468 USA
[14] CUNY, Adv Sci Res Ctr, Neurosci Initiat, 85 St Nicholas Terrace, New York, NY 10031 USA
基金
英国惠康基金; 英国医学研究理事会;
关键词
Alzheimer's disease; Oligodendrocyte; Myelin; co-expression network; Causal network; RNA sequencing; Proteomics; Differential expression; CNP; BIN1; AMYLOID PRECURSOR PROTEIN; FAST AXONAL-TRANSPORT; PROTEOLIPID PROTEIN; NERVOUS-SYSTEM; CNS MYELIN; TRANSGENIC MICE; TROPHIC SUPPORT; EXPRESSION DATA; UNITED-STATES; MOUSE MODEL;
D O I
10.1186/s13024-017-0219-3
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Background: Oligodendrocytes (OLs) and myelin are critical for normal brain function and have been implicated in neurodegeneration. Several lines of evidence including neuroimaging and neuropathological data suggest that Alzheimer's disease (AD) may be associated with dysmyelination and a breakdown of OL-axon communication. Methods: In order to understand this phenomenon on a molecular level, we systematically interrogated OL-enriched gene networks constructed from large-scale genomic, transcriptomic and proteomic data obtained from human AD postmortem brain samples. We then validated these networks using gene expression datasets generated from mice with ablation of major gene expression nodes identified in our AD-dysregulated networks. Results: The robust OL gene coexpression networks that we identified were highly enriched for genes associated with AD risk variants, such as BIN1 and demonstrated strong dysregulation in AD. We further corroborated the structure of the corresponding gene causal networks using datasets generated from the brain of mice with ablation of key network drivers, such as UGT8, CNP and PLP1, which were identified from human AD brain data. Further, we found that mice with genetic ablations of Cnp mimicked aspects of myelin and mitochondrial gene expression dysregulation seen in brain samples from patients with AD, including decreased protein expression of BIN1 and GOT2. Conclusions: This study provides a molecular blueprint of the dysregulation of gene expression networks of OL in AD and identifies key OL- and myelination-related genes and networks that are highly associated with AD.
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页数:20
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