Mesorhizobium xinjiangense sp. nov., isolated from rhizosphere soil of Alhagi sparsifolia

被引:2
作者
Meng, Dong [1 ]
Liu, Yu-Ling [1 ]
Zhang, Jun-Jie [2 ]
Gu, Peng-Fei [1 ]
Fan, Xiang-Yu [1 ]
Huang, Zhao-Song [1 ]
Ji, Yan [1 ]
Meng, Heng [1 ]
Du, Zong-Jun [3 ]
Li, Wei-Min [4 ]
Li, Qiang [1 ]
机构
[1] Jinan Univ, Sch Biol Sci & Technol, Jinan 250022, Peoples R China
[2] Zhengzhou Univ Light Ind, Coll Food & Bioengn, Zhengzhou 450000, Peoples R China
[3] Shandong Univ, Coll Marine Sci, Weihai 264209, Peoples R China
[4] Beijing Univ Agr, Agr Minist Agr & Rural Affairs, Key Lab Northern Urban Agr, Beijing 102206, Peoples R China
基金
中国国家自然科学基金;
关键词
Mesorhizobium; Phylogenetic analysis; 16S rRNA gene; Draft genome sequencing; Secondary metabolites;
D O I
10.1007/s00203-021-02686-9
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A beige-pigmented, Gram-strain-negative, aerobic, rod-shaped, non-flagellated and non-gliding bacterium, designated strain lm94(T), was isolated from rhizosphere soil of Alhagi sparsifolia obtained from Alar city, located in Xinjiang province, China. Growth occurred at 20-45 degrees C (optimum, 37 degrees C), in the presence of 0-6% (w/v) NaCl (optimum, 0-1%) and at pH 6.0-9.5 (optimum, pH 7.0-7.5). Phylogenetic analysis based on 16S rRNA gene sequence showed that strain lm94(T) belonged to the genus Mesorhizobium, with highest sequence similarity to Mesorhizobium wenxiniae WYCCWR 10195(T) (96.6%). Genome sequencing revealed a genome size of 5 256 375 bp and a G + C content of 63.6 mol%. The average nucleotide identity value and the digital DNA-DNA hybridization value between strain lm94(T) and M. wenxiniae LMG 30254(T) were 75.0% and 20.0%, respectively. The major respiratory quinone was Q-10. The major fatty acids were C-19:0 cyclo omega 8c and Summed Feature 8 (C-18:1 omega 6c and/or C-18:1 omega 7c) and its polar lipids consisted of phosphatidylethanolamine (PE), phosphatidylglycerol (PG), unidentified phospholipid (PL), phosphatidylcholine (PC), diphosphatidylglycerol (DPG), unidentified aminolipid (AL), unknown glycolipid (GL), unidentified aminophospholipid (APL2) and unidentified polar lipid (L1 and L2). On the basis of these data, strain lm94(T) is considered to represent a novel species of the genus Mesorhizobium, for which the name Mesorhizobium xinjiangense sp. nov. is proposed. The type strain is lm94(T) (=KCTC 72863(T)=CCTCC AB2019377(T)).
引用
收藏
页数:6
相关论文
共 20 条
[11]   AN INTEGRATED PROCEDURE FOR THE EXTRACTION OF BACTERIAL ISOPRENOID QUINONES AND POLAR LIPIDS [J].
MINNIKIN, DE ;
ODONNELL, AG ;
GOODFELLOW, M ;
ALDERSON, G ;
ATHALYE, M ;
SCHAAL, A ;
PARLETT, JH .
JOURNAL OF MICROBIOLOGICAL METHODS, 1984, 2 (05) :233-241
[12]   Metatranscriptomic and comparative genomic insights into resuscitation mechanisms during enrichment culturing [J].
Mu, Da-Shuai ;
Liang, Qi-Yun ;
Wang, Xiao-Man ;
Lu, De-Chen ;
Shi, Ming-Jing ;
Chen, Guan-Jun ;
Du, Zong-Jun .
MICROBIOME, 2018, 6
[13]   A Proposed Genus Boundary for the Prokaryotes Based on Genomic Insights [J].
Qin, Qi-Long ;
Xie, Bin-Bin ;
Zhang, Xi-Ying ;
Chen, Xiu-Lan ;
Zhou, Bai-Cheng ;
Zhou, Jizhong ;
Oren, Aharon ;
Zhang, Yu-Zhong .
JOURNAL OF BACTERIOLOGY, 2014, 196 (12) :2210-2215
[14]   JS']JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison [J].
Richter, Michael ;
Rossello-Mora, Ramon ;
Gloeckner, Frank Oliver ;
Peplies, Joerg .
BIOINFORMATICS, 2016, 32 (06) :929-931
[15]   Diversity of Rhizobia associated with Amorpha fruticosa isolated from Chinese soils and description of Mesorhizobium amorphae sp nov [J].
Wang, ET ;
van Berkum, P ;
Sui, XH ;
Beyene, D ;
Chen, WX ;
Martínez-Romero, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 :51-65
[16]   Haloferax larsenii sp nov, an extremely halophilic archaeon from a solar saltern [J].
Xu, Xue-Wei ;
Wu, Yue-Hong ;
Wang, Chun-Sheng ;
Oren, Aharon ;
Zhou, Pei-Jin ;
Wu, Min .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 :717-720
[17]   Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies [J].
Yoon, Seok-Hwan ;
Ha, Sung-Min ;
Kwon, Soonjae ;
Lim, Jeongmin ;
Kim, Yeseul ;
Seo, Hyungseok ;
Chun, Jongsik .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (05) :1613-1617
[18]   Mesorhizobium sediminum sp nov., isolated from deep-sea sediment [J].
Yuan, Chang-Guo ;
Jiang, Zhao ;
Xiao, Min ;
Zhou, En-Min ;
Kim, Chang-Jin ;
Hozzein, Wael N. ;
Park, Dong-Jin ;
Zhi, Xiao-Yang ;
Li, Wen-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 :4797-4802
[19]   Distinctive Mesorhizobium populations associated with Cicer arietinum L. in alkaline soils of Xinjiang, China [J].
Zhang, Jun Jie ;
Lou, Kai ;
Jin, Xiang ;
Mao, Pei Hong ;
Wang, En Tao ;
Tian, Chang Fu ;
Sui, Xin Hua ;
Chen, Wen Feng ;
Chen, Wen Xin .
PLANT AND SOIL, 2012, 353 (1-2) :123-134
[20]   Mesorhizobium wenxiniae sp nov., isolated from chickpea (Cicer arietinum L.) in China [J].
Zhang, Junjie ;
Guo, Chen ;
Chen, Wenfeng ;
de Lajudie, Philippe ;
Zhang, Zhiyan ;
Shang, Yimin ;
Wang, En Tao .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (06) :1930-1936