Spirosoma lituiforme sp nov., isolated from soil

被引:3
作者
Li, Weilan [1 ]
Lee, Seung-Yeol [1 ]
Park, Sangkyu [1 ]
Kim, Byung-Oh [2 ]
Ten, Leonid N. [1 ]
Jung, Hee-Young [1 ,3 ]
机构
[1] Kyungpook Natl Univ, Sch Appl Biosci, Daegu 41566, South Korea
[2] Kyungpook Natl Univ, Sch Food Sci & Biotechnol, Daegu 41566, South Korea
[3] Kyungpook Natl Univ, Inst Plant Med, Daegu 41566, South Korea
关键词
Spirosoma; Cytophagaceae; polyphasic taxonomy; PERFORMANCE LIQUID-CHROMATOGRAPHY; COMPLETE GENOME SEQUENCE; DEOXYRIBONUCLEIC-ACID; BACTERIAL SYSTEMATICS; EMENDED DESCRIPTION; GENUS SPIROSOMA; RESISTANT; TREES; WATER;
D O I
10.1007/s12275-017-7255-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative, non-motile, curved rod-shaped, aerobic bacterium, designated S1-2-4(T), was isolated from soil in Jeollabuk-do province, Republic of Korea, and was characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain S1-2-4(T) was a member of the family Cytophagaceae and most closely related to 'Spirosoma radiotolerans' DG5A (97.2%), Spirosoma fluviale MSd3(T) (96.4%), and Spirosoma linguale DSM 74(T) (96.3%). The genomic DNA G + C content of strain S1-2-4(T) was 49.7 mol%. The major fatty acids were summed feature 3 (C-16:1 omega 7c/C-16:1 omega 6c), C-16:1 omega 5c, and C-16:0, and the major polar lipid was phosphatidylethanolamine. MK-7 was the predominant respiratory quinone. Phenotypic and chemotaxonomic data supported the affiliation of strain S1-2-4(T) with the genus Spirosoma. DNA-DNA hybridization between strain S1-2-4(T) and 'Spirosoma radiotolerans' showed relatively low DNA-DNA relatedness (31%). Strain S1-2-4(T) could be distinguished from its closest phylogenetic neighbors based on its phenotypic, genotypic, and chemotaxonomic features. Therefore, strain S1-2-4(T) represents a novel member of the genus Spirosoma, for which the name Spirosoma lituiforme sp. nov. is proposed. The type strain is S12-4(T) (= KCTC 52724(T) = JCM 32128(T)).
引用
收藏
页码:856 / 861
页数:6
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