Individual Lysine Acetylations on the N Terminus of Saccharomyces cerevisiae H2A.Z Are Highly but Not Differentially Regulated

被引:20
作者
Mehta, Monika [1 ]
Braberg, Hannes [2 ,3 ]
Wang, Shuyi [2 ,3 ]
Lozsa, Anita [4 ]
Shales, Michael [2 ,3 ]
Solache, Alejandra [4 ]
Krogan, Nevan J. [2 ,3 ]
Keogh, Michael-Christopher [1 ]
机构
[1] Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10461 USA
[2] Univ Calif San Francisco, Dept Cellular & Mol Pharmacol, San Francisco, CA 94158 USA
[3] Univ Calif San Francisco, Calif Inst Quantitat Biomed Res, San Francisco, CA 94158 USA
[4] Millipore Corp, Temecula, CA 92590 USA
基金
美国国家卫生研究院;
关键词
ESSENTIAL CHARGE PATCH; HISTONE H2A.Z; GENE ACTIVITY; VARIANT HTZ1; YEAST; CHROMATIN; COMPLEX; GENOME; HETEROCHROMATIN; NUCLEOSOMES;
D O I
10.1074/jbc.M110.185967
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The multi-functional histone variant Htz1 (Saccharomyces cerevisiae H2A.Z) is acetylated on up to four N-terminal lysines at positions 3, 8, 10, and 14. It has thus been posited that specific acetylated forms of the histone could regulate distinct roles. Antibodies against Htz1-K8(Ac), -K10(Ac), and -K14(Ac) show that all three modifications are added by Esa1 acetyltransferase and removed by Hda1 deacetylase. Completely unacetylatable htz1 alleles exhibit widespread interactions in genome scale genetic screening. However, singly mutated (e. g. htz1-K8R) or singly acetylable (e. g. the triple mutant htz1-K3R/K10R/K14R) alleles show no significant defects in these analyses. This suggests that the N-terminal acetylations on Htz1 are internally redundant. Further supporting this proposal, each acetylation decays with similar kinetics when Htz1 transcription is repressed, and proteomic screening did not find a single condition in which one Htz1(Ac) was differentially regulated. However, whereas the individual acetylations on Htz1 may be redundant, they are not dispensable. Completely unacetylatable htz1 alleles display genetic interactions and phenotypes in common with and distinct from htz1 Delta. In addition, each Htz1 N-terminal lysine is deacetylated by Hda1 in response to benomyl and reacetylated when this agent is removed. Such active regulation suggests that acetylation plays a significant role in Htz1 function.
引用
收藏
页码:39855 / 39865
页数:11
相关论文
共 54 条
[41]   Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile [J].
Schuldiner, M ;
Collins, SR ;
Thompson, NJ ;
Denic, V ;
Bhamidipati, A ;
Punna, T ;
Ihmels, J ;
Andrews, B ;
Boone, C ;
Greenblatt, JF ;
Weissman, JS ;
Krogan, NJ .
CELL, 2005, 123 (03) :507-519
[42]   The delitto perfetto approach to in vivo site-directed mutagenesis and chromosome rearrangements with synthetic oligonucleotides in yeast [J].
Storici, Francesca ;
Resnick, Michael A. .
DNA REPAIR, PT B, 2006, 409 :329-+
[43]   Nap1 and Chz1 have Separate Htz1 Nuclear Import and Assembly Functions [J].
Straube, Korinna ;
Blackwell, Jeffrey S., Jr. ;
Pemberton, Lucy F. .
TRAFFIC, 2010, 11 (02) :185-197
[44]   Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin [J].
Suka, N ;
Suka, Y ;
Carmen, AA ;
Wu, JS ;
Grunstein, M .
MOLECULAR CELL, 2001, 8 (02) :473-479
[45]   RETRACTED: Activation of facultatively silenced Drosophila loci associates with increased acetylation of histone H2AvD (Retracted article. See vol. 18, pg. 1147, 2013) [J].
Tanabe, Masahiko ;
Kouzmenko, Alexander P. ;
Ito, Saya ;
Sawatsubashi, Shun ;
Suzuki, Eriko ;
Fujiyama, Sally ;
Yamagata, Kaoru ;
Zhao, Yue ;
Kimura, Shuhei ;
Ueda, Takashi ;
Murata, Takuya ;
Matsukawa, Hiroyuki ;
Takeyama, Ken-ichi ;
Kato, Shigeaki .
GENES TO CELLS, 2008, 13 (12) :1279-1288
[46]   How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers [J].
Taverna, Sean D. ;
Li, Haitao ;
Ruthenburg, Alexander J. ;
Allis, C. David ;
Patel, Dinshaw J. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (11) :1025-1040
[47]   New developments in post-translational modifications and functions of histone H2A variants [J].
Thambirajah, Anita A. ;
Li, Andra ;
Ishibashi, Toyotaka ;
Ausio, Juan .
BIOCHEMISTRY AND CELL BIOLOGY, 2009, 87 (01) :7-17
[48]  
Tong Amy Hin Yan, 2006, Methods Mol Biol, V313, P171
[49]   Temporal regulation of foregut development by HTZ-1/H2A.Z and PHA-4/FoxA [J].
Updike, Dustin L. ;
Mango, Susan E. .
PLOS GENETICS, 2006, 2 (09) :1500-1510
[50]   Functional characterization of the S-cerevisiae genome by gene deletion and parallel analysis [J].
Winzeler, EA ;
Shoemaker, DD ;
Astromoff, A ;
Liang, H ;
Anderson, K ;
Andre, B ;
Bangham, R ;
Benito, R ;
Boeke, JD ;
Bussey, H ;
Chu, AM ;
Connelly, C ;
Davis, K ;
Dietrich, F ;
Dow, SW ;
EL Bakkoury, M ;
Foury, F ;
Friend, SH ;
Gentalen, E ;
Giaever, G ;
Hegemann, JH ;
Jones, T ;
Laub, M ;
Liao, H ;
Liebundguth, N ;
Lockhart, DJ ;
Lucau-Danila, A ;
Lussier, M ;
M'Rabet, N ;
Menard, P ;
Mittmann, M ;
Pai, C ;
Rebischung, C ;
Revuelta, JL ;
Riles, L ;
Roberts, CJ ;
Ross-MacDonald, P ;
Scherens, B ;
Snyder, M ;
Sookhai-Mahadeo, S ;
Storms, RK ;
Véronneau, S ;
Voet, M ;
Volckaert, G ;
Ward, TR ;
Wysocki, R ;
Yen, GS ;
Yu, KX ;
Zimmermann, K ;
Philippsen, P .
SCIENCE, 1999, 285 (5429) :901-906