Deep Belief Network and Closed Polygonal Line for Lung Segmentation in Chest Radiographs

被引:18
作者
Peng, Tao [1 ,2 ]
Xu, Thomas Canhao [3 ,4 ]
Wang, Yihuai [1 ]
Li, Fanzhang [1 ]
机构
[1] Soochow Univ, Sch Comp Sci & Technol, 1 Shizi Rd, Suzhou 215006, Jiangsu, Peoples R China
[2] Univ Texas Southwestern Med Ctr Dallas, Dept Radiat Oncol, 2280 Inwood Rd, Dallas, TX 75235 USA
[3] Beijing Normal Univ BNU, Div Sci & Technol, 2000 Jintong Rd, Zhuhai 519087, Guangdong, Peoples R China
[4] Hong Kong Baptist Univ HKBU, United Int Coll, 2000 Jintong Rd, Zhuhai 519087, Guangdong, Peoples R China
基金
美国国家科学基金会;
关键词
lung segmentation; chest radiographs; principal curve; deep belief network; closed polygonal line method; machine learning; IMAGE SEGMENTATION; LEVEL SET; SHAPE; ALGORITHM; DIAGNOSIS; CLASSIFICATION; DESIGN; MODELS; FIELDS; NODULE;
D O I
10.1093/comjnl/bxaa148
中图分类号
TP3 [计算技术、计算机技术];
学科分类号
0812 ;
摘要
Due to the varying appearance in the upper clavicle bone region, sharp corner at the costophrenic angle, the presence of strong edges at the rib cage and clavicle and the lack of a consistent anatomical shape among different individuals, accurate segmentation of lung on chest radiographs remains challenging. In this work, we propose a novel segmentation method for lung segmentation, containing two subnetworks, where few manually delineated points are used as the approximate initialization. The first one is a preprocessing subnetwork based on a deep learning model (i.e. Deep Belief Network and K-Nearest Neighbor). The second one is a refinement subnetwork, designed to make the preprocessed result to be optimized by combining an improved principal curve method and a machine learning method. To prove the performance of the proposed method, several public datasets were evaluated with Dice Similarity Coefficient (DSC), overlap score (omega), Sensitivity (Sen), Positive Predictive Value (PPV), global Error (E) and execution time (t). Compared with state-of-the-art methods, our method reaches superior segmentation performance.
引用
收藏
页码:1107 / 1128
页数:22
相关论文
共 65 条
[1]   Unsupervised Medical Image Segmentation Based on the Local Center of Mass [J].
Aganj, Iman ;
Harisinghani, Mukesh G. ;
Weissleder, Ralph ;
Fischl, Bruce .
SCIENTIFIC REPORTS, 2018, 8
[2]   Lung segmentation on standard and mobile chest radiographs using oriented Gaussian derivatives filter [J].
Ahmad, Wan Siti Halimatul Munirah Wan ;
Zaki, W. Mimi Diyana W. ;
Fauzi, Mohammad Faizal Ahmad .
BIOMEDICAL ENGINEERING ONLINE, 2015, 14
[3]   Deep Learning for Brain MRI Segmentation: State of the Art and Future Directions [J].
Akkus, Zeynettin ;
Galimzianova, Alfiia ;
Hoogi, Assaf ;
Rubin, Daniel L. ;
Erickson, Bradley J. .
JOURNAL OF DIGITAL IMAGING, 2017, 30 (04) :449-459
[4]   Contour-based shape representation using principal curves [J].
Ataer-Cansizoglu, Esra ;
Bas, Erhan ;
Kalpathy-Cramer, Jayashree ;
Sharp, Greg C. ;
Erdogmus, Deniz .
PATTERN RECOGNITION, 2013, 46 (04) :1140-1150
[5]   Parameter Selection for Principal Curves [J].
Biau, Gerard ;
Fischer, Aurelie .
IEEE TRANSACTIONS ON INFORMATION THEORY, 2012, 58 (03) :1924-1939
[6]   Optimisation of a machine learning algorithm in human locomotion using principal component and discriminant function analyses [J].
Bisele, Maria ;
Bencsik, Martin ;
Lewis, Martin G. C. ;
Barnett, Cleveland T. .
PLOS ONE, 2017, 12 (09)
[7]   A review on lung boundary detection in chest X-rays [J].
Candemir, Sema ;
Antani, Sameer .
INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 2019, 14 (04) :563-576
[8]   Lung Segmentation in Chest Radiographs Using Anatomical Atlases With Nonrigid Registration [J].
Candemir, Sema ;
Jaeger, Stefan ;
Palaniappan, Kannappan ;
Musco, Jonathan P. ;
Singh, Rahul K. ;
Xue, Zhiyun ;
Karargyris, Alexandros ;
Antani, Sameer ;
Thoma, George ;
McDonald, Clement J. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2014, 33 (02) :577-590
[9]   A Parallel Markov Cerebrovascular Segmentation Algorithm Based on Statistical Model [J].
Cao, Rong-Fei ;
Wang, Xing-Ce ;
Wu, Zhong-Ke ;
Zhou, Ming-Quan ;
Liu, Xin-Yu .
JOURNAL OF COMPUTER SCIENCE AND TECHNOLOGY, 2016, 31 (02) :400-416
[10]   Role of Gist and PHOG Features in Computer-Aided Diagnosis of Tuberculosis without Segmentation [J].
Chauhan, Arun ;
Chauhan, Devesh ;
Rout, Chittaranjan .
PLOS ONE, 2014, 9 (11)