Hydrolysis of organophosphate compounds by mutant butyrylcholinesterase: A story of two histidines

被引:10
作者
Amitay, Moshe
Shurki, Avital [1 ]
机构
[1] Hebrew Univ Jerusalem, Inst Drug Res, Lise Meitner Minerva Ctr Computat Quantum Chem, IL-91120 Jerusalem, Israel
基金
以色列科学基金会;
关键词
enzyme catalysis; reaction mechanism; butyrylcholinesterase; general acid-base catalysis; organophosphate esters; dephosphorylation; RNAse A; toxicology; computer simulations; ANHYDRIDE HYDROLASE ACTIVITY; PHOSPHATE ESTER HYDROLYSIS; SERINE-PROTEASE CATALYSIS; FREE-ENERGY RELATIONSHIPS; CRYSTAL-STRUCTURE; ELECTRON-TRANSFER; DEACYLATION STEP; AGENT TOXICITY; RIBONUCLEASE-A; G117H MUTANT;
D O I
10.1002/prot.22864
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This study is aimed at understanding the hydrolysis mechanism of organophosphate (OP) compounds by G117H-BChE. It is a theoretical study that focuses on the role of the G117H mutation in the dephosphorylation step. Various proposed mechanisms are examined. We show that His117 acts as a general base by activating a water molecule, and thus assisting its nucleophilic attack on the phosphate. The calculated reaction energy profile agrees well with the experimental data. Moreover, analysis of the reaction via its two hypothetical elementary steps, proton transfer and hydroxide attack, supports the role of His117 as a general base. Further support to the proposed mechanism is gained by structural comparison of the active site to RNAse A, which has similar composition of substrate and functional groups. The similarity between these enzymes extends beyond the structure and also becomes evident when comparing functionality of various active sites residues as well as rate-pH dependence obtained in the two cases. Moreover, it is demonstrated that an extended form of Bevilacqua's model (Biochemistry 2003;42:2259-2265) may resolve the apparent contradictions between the proposed mechanism and various experimental observations regarding rate-pH dependence. Finally, that same model is shown to rationalize the hydrolase activity of G117D BChE, an observation which is considered puzzling. It is concluded that G117H-BChE hydrolyzes echothiophate and possibly other OP compounds via a general acid-base mechanism. On the basis of this mechanism, one can now proceed with rational design aimed at improving the enzyme by exploiting both the structural and mechanistic knowledge. Proteins 2011; 79:352-364. (C) 2010 Wiley-Liss, Inc.
引用
收藏
页码:352 / 364
页数:13
相关论文
共 74 条
[31]   A single amino acid substitution, Gly117His, confers phosphotriesterase (organophosphorus acid anhydride hydrolase) activity on human butyrylcholinesterase [J].
Lockridge, O ;
Blong, RM ;
Masson, P ;
Froment, MT ;
Millard, CB ;
Broomfield, CA .
BIOCHEMISTRY, 1997, 36 (04) :786-795
[32]  
Lovell SC, 2000, PROTEINS, V40, P389, DOI 10.1002/1097-0134(20000815)40:3<389::AID-PROT50>3.3.CO
[33]  
2-U
[34]   Substrate activation in acetylcholinesterase induced by low pH or mutation in the π-cation subsite [J].
Masson, P ;
Schopfer, LM ;
Bartels, CF ;
Froment, MT ;
Ribes, F ;
Nachon, F ;
Lockridge, O .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 2002, 1594 (02) :313-324
[35]   A collaborative endeavor to design cholinesterase-based catalytic scavengers against toxic organophosphorus esters [J].
Masson, Patrick ;
Nachon, Florian ;
Broomfield, Clarence A. ;
Lenz, David E. ;
Verdier, Laurent ;
Schopfer, Lawrence M. ;
Lockridge, Oksana .
CHEMICO-BIOLOGICAL INTERACTIONS, 2008, 175 (1-3) :273-280
[36]   Engineering of catalytic bioscavengers of organophosphorus compounds [J].
Masson, Patrick ;
Nachon, Florian ;
Rochu, Daniel .
BULLETIN DE L ACADEMIE NATIONALE DE MEDECINE, 2007, 191 (01) :95-111
[37]  
Masson P, 2009, HANDBOOK OF TOXICOLOGY OF CHEMICAL WARFARE AGENTS, P1053, DOI 10.1016/B978-012374484-5.00070-5
[38]   ELECTROSTATIC INTERACTION OF A SOLUTE WITH A CONTINUUM - A DIRECT UTILIZATION OF ABINITIO MOLECULAR POTENTIALS FOR THE PREVISION OF SOLVENT EFFECTS [J].
MIERTUS, S ;
SCROCCO, E ;
TOMASI, J .
CHEMICAL PHYSICS, 1981, 55 (01) :117-129
[39]   APPROXIMATE EVALUATIONS OF THE ELECTROSTATIC FREE-ENERGY AND INTERNAL ENERGY CHANGES IN SOLUTION PROCESSES [J].
MIERTUS, S ;
TOMASI, J .
CHEMICAL PHYSICS, 1982, 65 (02) :239-245
[40]   ANTICHOLINESTERASES - MEDICAL APPLICATIONS OF NEUROCHEMICAL PRINCIPLES [J].
MILLARD, CB ;
BROOMFIELD, CA .
JOURNAL OF NEUROCHEMISTRY, 1995, 64 (05) :1909-1918