Structure of the O-specific polysaccharide from the marine bacterium Rheinheimera japonica KMM 9513T, containing N-glycosidic bond between monosaccharides

被引:2
作者
Kokoulin, Maxim S. [1 ]
Kalinovsky, Anatoly I. [1 ]
Tomshich, Svetlana V. [1 ]
Romanenko, Lyudmila A. [1 ]
Mikhailov, Valery V. [1 ,2 ]
Komandrova, Nadezhda A. [1 ]
机构
[1] Russian Acad Sci, Far Eastern Branch, GB Elyakov Pacific Inst Bioorgan Chem, 100 Let Vladivostoku Prosp,159, Vladivostok 690022, Russia
[2] Far Eastern Fed Univ, Suhanova St 8, Vladivostok 690950, Russia
关键词
Marine bacterium; Rheinheimera japonica; O-Specific polysaccharide; Structure; N-Glycosidic bond; C-13-NMR DATA; SEPSIS;
D O I
10.1016/j.carres.2016.03.027
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The O-specific polysaccharide was isolated from the lipopolysaccharide of type strain Rheinheimera japonica KMM 9513(T) and studied by sugar analysis, Smith degradation, and two-dimensional H-1 and C-13 NMR spectroscopy including H-1,H-1-TOCSY, H-1,H-1-COSY, H-1,H-1-ROESY, H-1,C-13-HSQC, H-1,C-13-HMBC, H-1,C-13-H2BC and H-1,C-13-HSQC-TOCSY experiments. The new structure of the O-specific polysaccharide of R. japonica KMM 9513(T) containing N-glycosidic bond was established: [GRAPHICS] (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:6 / 12
页数:7
相关论文
共 14 条
  • [1] Conformational preferences in glycosylamines. Implications for the exo-anomeric effect
    Batchelor, RJ
    Green, DF
    Johnston, BD
    Patrick, BO
    Pinto, BM
    [J]. CARBOHYDRATE RESEARCH, 2001, 330 (03) : 421 - 426
  • [2] C-13 NUCLEAR MAGNETIC-RESONANCE SPECTROSCOPY OF MONOSACCHARIDES
    BOCK, K
    PEDERSEN, C
    [J]. ADVANCES IN CARBOHYDRATE CHEMISTRY AND BIOCHEMISTRY, 1983, 41 : 27 - 66
  • [3] Structural elucidation of an asparagine-linked oligosaccharide from the hyperthermophilic archaeon, Archaeoglobus fulgidus
    Fujinami, Daisuke
    Nyirenda, James
    Matsumoto, Shunsuke
    Kohda, Daisuke
    [J]. CARBOHYDRATE RESEARCH, 2015, 413 : 55 - 62
  • [4] COMPUTER-ASSISTED STRUCTURAL-ANALYSIS OF POLYSACCHARIDES WITH AN EXTENDED VERSION OF CASPER USING H-1-NMR AND C-13-NMR DATA
    JANSSON, PE
    KENNE, L
    WIDMALM, G
    [J]. CARBOHYDRATE RESEARCH, 1989, 188 : 169 - 191
  • [5] The O-specific polysaccharide of the marine bacterium Rheinheimera pacifica KMM 1406T containing D- and L-2-acetamido-2-deoxy-galacturonic acids
    Komandrova, Nadezhda A.
    Kokoulin, Maxim S.
    Kalinovsky, Anatoliy I.
    Tomshich, Svetlana V.
    Romanenko, Lyudmila A.
    Vaskovsky, Victor E.
    [J]. CARBOHYDRATE RESEARCH, 2014, 394 : 1 - 6
  • [6] ASSIGNMENT OF ABSOLUTE-CONFIGURATION OF SUGARS BY GIC OF THEIR ACETYLATED GLYCOSIDES FORMED FROM CHIRAL ALCOHOLS
    LEONTEIN, K
    LINDBERG, B
    LONNGREN, J
    [J]. CARBOHYDRATE RESEARCH, 1978, 62 (02) : 359 - 362
  • [7] A COMPUTER-ASSISTED STRUCTURAL-ANALYSIS OF REGULAR POLYSACCHARIDES ON THE BASIS OF C-13-NMR DATA
    LIPKIND, GM
    SHASHKOV, AS
    KNIREL, YA
    VINOGRADOV, EV
    KOCHETKOV, NK
    [J]. CARBOHYDRATE RESEARCH, 1988, 175 (01) : 59 - 75
  • [8] Pseudoalteromonas strains are potent immunomodulators owing to low-stimulatory LPS
    Maaetoft-Udsen, Kristina
    Vynne, Nikolaj
    Heegaard, Peter M. H.
    Gram, Lone
    Frokiaer, Hanne
    [J]. INNATE IMMUNITY, 2013, 19 (02) : 160 - 173
  • [9] The Structural Diversity of Carbohydrate Antigens of Selected Gram-Negative Marine Bacteria
    Nazarenko, Evgeny L.
    Crawford, Russell J.
    Ivanova, Elena P.
    [J]. MARINE DRUGS, 2011, 9 (10) : 1914 - 1954
  • [10] The host response to endotoxin, antilipopolysaccharide strategies, and the management of severe sepsis
    Opal, Steven M.
    [J]. INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY, 2007, 297 (05) : 365 - 377