Genome-Wide Identification and Analysis of FKBP Gene Family in Wheat (Triticum asetivum)

被引:6
|
作者
Ge, Qiang [1 ,2 ]
Peng, Peipei [1 ]
Cheng, Mingyue [1 ]
Meng, Yanjun [1 ]
Cao, Yuan [1 ]
Zhang, Shuya [1 ]
Long, Yu [3 ]
Li, Gezi [1 ,2 ]
Kang, Guozhang [1 ,2 ]
机构
[1] Henan Agr Univ, Natl Engn Res Ctr Wheat, Longzi Lake Campus, Zhengzhou 450046, Peoples R China
[2] Henan Agr Univ, Natl Key Lab Wheat & Maize Crop Sci, Longzi Lake Campus, Zhengzhou 450046, Peoples R China
[3] Henan Univ, Sch Life Sci, State Key Lab Crop Stress Adaptat & Improvement, Kaifeng 475004, Peoples R China
关键词
FKBP; PPIase; qRT-PCR; biotic and abiotic stress; IMMUNOPHILINS; EXPRESSION; STRESS; OVEREXPRESSION; ARABIDOPSIS; THERMOTOLERANCE; LOCALIZATION; DUPLICATION; ISOMERASES; PARVULINS;
D O I
10.3390/ijms232314501
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
FK506-binding protein (FKBP) genes have been found to play vital roles in plant development and abiotic stress responses. However, limited information is available about this gene family in wheat (Triticum aestivum L.). In this study, a total of 64 FKBP genes were identified in wheat via a genome-wide analysis involving a homologous search of the latest wheat genome data, which was unevenly distributed in 21 chromosomes, encoded 152 to 649 amino acids with molecular weights ranging from 16 kDa to 72 kDa, and was localized in the chloroplast, cytoplasm, nucleus, mitochondria, peroxisome and endoplasmic reticulum. Based on sequence alignment and phylogenetic analysis, 64 TaFKBPs were divided into four different groups or subfamilies, providing evidence of an evolutionary relationship with Aegilops tauschii, Brachypodium distachyon, Triticum dicoccoides, Arabidopsis thaliana and Oryza sativa. Hormone-related, abiotic stress-related and development-related cis-elements were preferentially presented in promoters of TaFKBPs. The expression levels of TaFKBP genes were investigated using transcriptome data from the WheatExp database, which exhibited tissue-specific expression patterns. Moreover, TaFKBPs responded to drought and heat stress, and nine of them were randomly selected for validation by qRT-PCR. Yeast cells expressing TaFKBP19-2B-2 or TaFKBP18-6B showed increased influence on drought stress, indicating their negative roles in drought tolerance. Collectively, our results provide valuable information about the FKBP gene family in wheat and contribute to further characterization of FKBPs during plant development and abiotic stress responses, especially in drought stress.
引用
收藏
页数:25
相关论文
共 50 条
  • [41] Genome-wide analysis and identification of the TBL gene family in Eucalyptus grandis
    Tang, Jiye
    Ling, Tenghong
    Li, Huiling
    Fan, Chunjie
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [42] Genome-wide identification, characterization, and expression patterns analysis of the SBP-box gene family in wheat (Triticum aestivum L.)
    Li, Ying
    Song, Qilu
    Zhang, Yamin
    Li, Zheng
    Guo, Jialin
    Chen, Xinhong
    Zhang, Gaisheng
    SCIENTIFIC REPORTS, 2020, 10 (01)
  • [43] Genome-wide identification of and functional insights into the late embryogenesis abundant (LEA) gene family in bread wheat (Triticum aestivum)
    Liu, Hao
    Xing, Mingyan
    Yang, Wenbo
    Mu, Xiaoqian
    Wang, Xin
    Lu, Feng
    Wang, Yao
    Zhang, Linsheng
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [44] Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris
    Kong, Weilong
    Yang, Shaozong
    Wang, Yulu
    Bendahmane, Mohammed
    Fu, Xiaopeng
    PEERJ, 2017, 5
  • [45] Genome-wide identification and characterization of WRKY gene family in Salix suchowensis
    Bi, Changwei
    Xu, Yiqing
    Ye, Qiaolin
    Yin, Tongming
    Ye, Ning
    PEERJ, 2016, 4
  • [46] Genome-wide identification of the expansin gene family in tobacco (Nicotiana tabacum)
    Ding, Anming
    Marowa, Prince
    Kong, Yingzhen
    MOLECULAR GENETICS AND GENOMICS, 2016, 291 (05) : 1891 - 1907
  • [47] Genome-wide sequence and expressional analysis of autophagy Gene family in bread wheat (Triticum aestivum L.)
    Yue, Wenjie
    Nie, Xiaojun
    Cui, Licao
    Zhi, Yongqiang
    Zhang, Ting
    Du, Xianghong
    Song, Weining
    JOURNAL OF PLANT PHYSIOLOGY, 2018, 229 : 7 - 21
  • [48] Genome-wide identification and analysis of the IQM gene family in soybean
    Lv, Tianxiao
    Liu, Qiongrui
    Xiao, Hong
    Fan, Tian
    Zhou, Yuping
    Wang, Jinxing
    Tian, Chang-en
    FRONTIERS IN PLANT SCIENCE, 2023, 13
  • [49] Genome-wide identification and analysis of FK506-binding protein gene family in peach (Prunus persica)
    Zhang, Yanping
    Han, Jan
    Liu, Dan
    Wen, Xicheng
    Li, Yu
    Tao, Ran
    Peng, Yongbin
    Fang, Jinggui
    Wang, Chen
    GENE, 2014, 536 (02) : 416 - 424
  • [50] Genome-wide identification and analysis of the regulation wheat DnaJ family genes following wheat yellow mosaic virus infection
    Liu Ting-ting
    Xu Miao-ze
    Gao Shi-qi
    Zhang Yang
    Hu Yang
    Jin Peng
    Cai Lin-na
    Cheng Ye
    Chen Jian-ping
    Yang Jian
    Zhong Kai-li
    JOURNAL OF INTEGRATIVE AGRICULTURE, 2022, 21 (01) : 153 - 169