Paenibacillus oceani sp. nov., isolated from surface seawater

被引:6
作者
Chen, Yu-Feng [1 ,2 ,3 ]
Ye, Lin [2 ,3 ]
Huang, Hui-Qin [2 ,3 ]
Jiang, Ming-Guo [4 ]
Hu, Yong-Hua [2 ,3 ,5 ]
Sun, Dong-Mei [1 ]
Mo, Kun-Lian [2 ,3 ]
机构
[1] Heilongjiang Bayi Agr Univ, Coll Life Sci & Technol, Daqing 163000, Peoples R China
[2] CATAS, Inst Trop Biosci & Biotechnol, Hainan Acad Trop Agr Resource, Haikou 571101, Hainan, Peoples R China
[3] Hainan Prov Key Lab Funct Components Res & Utiliz, Haikou 571101, Hainan, Peoples R China
[4] Guangxi Univ Nationalities, Sch Marine Sci & Biotechnol, Guangxi Key Lab Polysaccharide Mat & Modificat, Nanning 530008, Peoples R China
[5] Pilot Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
关键词
16S rRNA gene; polyphasic taxonomy; Paenibacillus oceani sp; nov; PROPOSED MINIMAL STANDARDS; RHIZOSPHERE; BACTERIUM; SOIL;
D O I
10.1099/ijsem.0.005024
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain- positive and motile bacterial strain, designated IB182363T, was isolated from surface seawater of the South China Sea. Cells grew at pH 5.0-9.5 (optimum, pH 7.0-8.0), 20-40 degrees C (optimum, 30 degrees C) and with 1-8 % (w/v) NaCl (optimum, 2-4 %). On the basis of 16S rRNA gene sequence analysis, strain IB182363T was affiliated to the genus Paenibacillus and the closest phylogenetically related species was Paenibacillus ginsengarvi DSM18677T with 96.9 % sequence similarity. The values of whole genome average nucleotide identity analysis and digital DNA-DNA hybridization between the isolate and the closely related type strains were less than 86.3 and 25.6 %, respectively. Chemotaxonomic analysis revealed that strain IB182363T possessed meso- diaminopimelic acid in the cell- wall peptidoglycan and contained menaquinone MK-7 as the predominant isoprenoid quinone. The major cellular fatty acids were anteiso- C15:0, C16: 0 and iso- C16:0. The polar lipids comprised phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, one unidentified glycolipid, two unidentified aminolipids, two unidentified phospholipids and four unidentified aminophospholipids. The genomic DNA G+C content was 54.5 mol%. On the basis of the above results, strain IB182363T represents a novel species of the genus Paenibacillus, for which we propose the name Paenibacillus oceani sp. nov. with the type strain IB182363T (=MCCC 1K04630T=JCM 34214T).
引用
收藏
页数:7
相关论文
共 48 条
[1]   Paenibacillus helianthi sp. nov., a nitrogen fixing species isolated from the rhizosphere of Helianthus annuus L. [J].
Ambrosini, Adriana ;
Sant'Anna, Fernando Hayashi ;
Heinzmann, Julia ;
Fernandes, Gabriela de Carvalho ;
Bach, Evelise ;
Pereira Passaglia, Luciane Maria .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2018, 111 (12) :2463-2471
[2]  
ASH C, 1993, ANTON LEEUW INT J G, V64, P253
[3]   Paenibacillus riograndensis sp nov., a nitrogen-fixing species isolated from the rhizosphere of Triticum aestivum [J].
Beneduzi, Anelise ;
Costa, Pedro B. ;
Parma, Marcia ;
Melo, Itamar S. ;
Bodanese-Zanettini, Maria Helena ;
Passaglia, Luciane M. P. .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 :128-133
[4]   Desertibacillus haloalkaliphilus gen. nov., sp nov., isolated from a saline desert [J].
Bhatt, Hitarth B. ;
Begum, M. Azmatunnisa ;
Chintalapati, Sasikala ;
Chintalapati, Venkata Ramana ;
Singh, Satya P. .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (11) :4435-4442
[5]   RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes [J].
Brettin, Thomas ;
Davis, James J. ;
Disz, Terry ;
Edwards, Robert A. ;
Gerdes, Svetlana ;
Olsen, Gary J. ;
Olson, Robert ;
Overbeek, Ross ;
Parrello, Bruce ;
Pusch, Gordon D. ;
Shukla, Maulik ;
Thomason, James A., III ;
Stevens, Rick ;
Vonstein, Veronika ;
Wattam, Alice R. ;
Xia, Fangfang .
SCIENTIFIC REPORTS, 2015, 5
[6]  
Chun J, 2018, INT J SYST EVOL MICR, V68, P461, DOI [10.1099/ijsem.0.002516, 10.1099/ijsem.0.002532]
[7]   Paenibacillus flagellatus sp. nov., isolated from selenium mineral soil [J].
Dai, Xingli ;
Shi, Kaixiang ;
Wang, Xin ;
Fan, Jun ;
Wang, Rui ;
Zheng, Shixue ;
Wang, Gejiao .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (01) :183-188
[8]   Paenibacillus borealis sp, nov., a nitrogen-fixing species isolated from spruce forest humus in Finland [J].
Elo, S ;
Suominen, I ;
Kämpfer, P ;
Juhanoja, J ;
Salkinoja-Salonen, M ;
Haahtela, K .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :535-545
[9]   EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].
FELSENSTEIN, J .
JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376
[10]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&