Wastewater is a robust proxy for monitoring circulating SARS-CoV-2 variants

被引:5
作者
Amman, Fabian [1 ]
Bergthaler, Andreas [2 ]
机构
[1] Austrian Acad Sci, CeMM Res Ctr Mol Med, Vienna, Austria
[2] Med Univ Vienna, Vienna, Austria
关键词
D O I
10.1038/s41587-022-01388-x
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Genomic surveillance is important for pandemic preparedness. By deep sequencing of wastewater samples, we monitored the genetic dynamics of circulating SARS-CoV-2 virus variants in Austria from December 2020 to February 2022. We show how wastewater-based epidemiology enables robust quantification of viral spatiotemporal dynamics as well as the detection of emergent new variants.
引用
收藏
页码:1768 / 1769
页数:2
相关论文
共 5 条
[1]   Wastewater surveillance of SARS-CoV-2 in Bangladesh: Opportunities and challenges [J].
Haque, Rehnuma ;
Moe, Christine L. ;
Raj, Suraja J. ;
Ong, Li ;
Charles, Katrina ;
Ross, Allen G. ;
Shirin, Tahmina ;
Raqib, Rubhana ;
Sarker, Protim ;
Rahman, Mahbubur ;
Rahman, Mohammed Ziaur ;
Amin, Nuhu ;
Mahmud, Zahid Hayat ;
Rahman, Mahbubur ;
Johnston, Dara ;
Akter, Nargis ;
Khan, Taqsem A. ;
Hossain, Md Alamgir ;
Hasan, Rezaul ;
Islam, M. Tahmidul ;
Bhattacharya, Prosun .
CURRENT OPINION IN ENVIRONMENTAL SCIENCE & HEALTH, 2022, 27
[2]  
Karthikeyan S, 2022, NATURE, V609, P101, DOI [10.1038/s41586-022-05049-6, 10.1101/2021.12.21.21268143]
[3]   Measurement of SARS-CoV-2 RNA in wastewater tracks community infection dynamics [J].
Peccia, Jordan ;
Zulli, Alessandro ;
Brackney, Doug E. ;
Grubaugh, Nathan D. ;
Kaplan, Edward H. ;
Casanovas-Massana, Arnau ;
Ko, Albert I. ;
Malik, Amyn A. ;
Wang, Dennis ;
Wang, Mike ;
Warren, Joshua L. ;
Weinberger, Daniel M. ;
Arnold, Wyatt ;
Omer, Saad B. .
NATURE BIOTECHNOLOGY, 2020, 38 (10) :1164-+
[4]   Understanding and managing uncertainty and variability for wastewater monitoring beyond the pandemic: Lessons learned from the United Kingdom national COVID-19 surveillance programmes [J].
Wade, Matthew J. ;
Lo Jacomo, Anna ;
Armenise, Elena ;
Brown, Mathew R. ;
Bunce, Joshua T. ;
Cameron, Graeme J. ;
Fang, Zhou ;
Farkas, Kata ;
Gilpin, Deidre F. ;
Graham, David W. ;
Grimsley, Jasmine M. S. ;
Hart, Alwyn ;
Hoffmann, Till ;
Jackson, Katherine J. ;
Jones, David L. ;
Lilley, Chris J. ;
McGrath, John W. ;
McKinley, Jennifer M. ;
McSparron, Cormac ;
Nejad, Behnam F. ;
Morvan, Mario ;
Quintela-Baluja, Marcos ;
Roberts, Adrian M. I. ;
Singer, Andrew C. ;
Souque, Celia ;
Speight, Vanessa L. ;
Sweetapple, Chris ;
Walkers, David ;
Watts, Glenn ;
Weightman, Andrew ;
Kasprzyk-Hordern, Barbara .
JOURNAL OF HAZARDOUS MATERIALS, 2022, 424
[5]   Making waves: Wastewater surveillance of SARS-CoV-2 in an endemic future [J].
Wu, Fuqing ;
Lee, Wei Lin ;
Chen, Hongjie ;
Gu, Xiaoqiong ;
Chandra, Franciscus ;
Armas, Federica ;
Xiao, Amy ;
Leifels, Mats ;
Rhode, Steven F. ;
Wuertz, Stefan ;
Thompson, Janelle ;
Alm, Eric J. .
WATER RESEARCH, 2022, 219