Molecular biodiversity of benthic communities in deep-sea sediments-examples from the phylum Foraminifera and Nematoda

被引:0
作者
Bhadury, Punyasloke [1 ]
机构
[1] Indian Inst Sci Educ & Res Kolkata, Integrat Taxon & Microbial Ecol Res Grp, Dept Biol Sci, Nadia, W Bengal, India
关键词
Biodiversity; Landscape; Meiobenthic; Biogeographic; DIVERSITY; LINEAGES; PATTERNS; GENOME;
D O I
暂无
中图分类号
P7 [海洋学];
学科分类号
0707 ;
摘要
Biodiversity in deep-sea environments is very high but often under-estimated to a large extent due to paucity in sampling and taxonomic intractability of certain faunal groups. In deep-sea benthic environments, two faunal groups namely Foraminifera and Nematoda often dominate in their abundance and contribute to major ecosystem processes. However, information at the species level and biogeographic patterns of these two major benthic faunal groups are largely unknown with some scattered studies undertaken so far based on the application of molecular techniques. This review highlights how application of molecular techniques, including next generation sequencing (NGS) methodologies have improved our understanding of biodiversity patterns of two major groups, namely Foraminifera and Nematoda from deep-sea benthic habitats.
引用
收藏
页码:709 / 713
页数:5
相关论文
共 20 条
[1]   Molecular Diversity of Fungal Phylotypes Co-Amplified Alongside Nematodes from Coastal and Deep-Sea Marine Environments [J].
Bhadury, Punyasloke ;
Bik, Holly ;
Lambshead, John D. ;
Austen, Melanie C. ;
Smerdon, Gary R. ;
Rogers, Alex D. .
PLOS ONE, 2011, 6 (10)
[2]   Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments [J].
Bik, Holly M. ;
Sung, Way ;
De Ley, Paul ;
Baldwin, James G. ;
Sharma, Jyotsna ;
Rocha-Olivares, Axayacatl ;
Thomas, W. Kelley .
MOLECULAR ECOLOGY, 2012, 21 (05) :1048-1059
[3]   Patterns of Deep-Sea Genetic Connectivity in the New Zealand Region: Implications for Management of Benthic Ecosystems [J].
Bors, Eleanor K. ;
Rowden, Ashley A. ;
Maas, Elizabeth W. ;
Clark, Malcolm R. ;
Shank, Timothy M. .
PLOS ONE, 2012, 7 (11)
[4]  
Gage J. D., 1991, Deep-Sea Biology: A Natural History of Organisms at the Deep-Sea Floor, DOI DOI 10.2307/5527
[5]  
Gooday AJ, 2008, GEOL SOC SPEC PUBL, V303, P97, DOI 10.1144/SP303.8
[6]   Genetic diversity and habitats of two enigmatic marine alveolate lineages [J].
Groisillier, A ;
Massana, R ;
Valentin, K ;
Vaulot, D ;
Guilloul, L .
AQUATIC MICROBIAL ECOLOGY, 2006, 42 (03) :277-291
[7]  
HESSLER RR, 1967, DEEP-SEA RES, V14, P65
[8]  
LAMBSHEAD PJD, 1993, OCEANIS S D, V19, P5
[9]   Marine nematode deep-sea biodiversity - hyperdiverse or hype? [J].
Lambshead, PJD ;
Boucher, G .
JOURNAL OF BIOGEOGRAPHY, 2003, 30 (04) :475-485
[10]   Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments [J].
Lecroq, Beatrice ;
Lejzerowicz, Franck ;
Bachar, Dipankar ;
Christen, Richard ;
Esling, Philippe ;
Baerlocher, Loic ;
Osteras, Magne ;
Farinelli, Laurent ;
Pawlowski, Jan .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (32) :13177-13182