Agromyces insulae sp nov., an actinobacterium isolated from a soil sample

被引:5
作者
Huang, Jian-Rong [1 ]
Ming, Hong [2 ,3 ]
Li, Shuai [1 ]
Meng, Xiao-Lin [1 ]
Zhang, Jian-Xin [1 ]
Thi-Nhan Khieu [3 ,4 ]
Tang, Zhong [5 ]
Li, Wen-Jun [3 ,6 ,7 ]
Nie, Guo-Xing [1 ]
机构
[1] Henan Normal Univ, Coll Fisheries, Xinxiang 453007, Peoples R China
[2] Xinxiang Med Univ, Coll Life Sci & Technol, Xinxiang 453003, Peoples R China
[3] Yunnan Univ, Yunnan Inst Microbiol, Kunming 650091, Peoples R China
[4] Hanoi Univ Sci & Technol, Sch Biotechnol & Food Technol, Dept Food Technol, Hanoi, Vietnam
[5] Guangxi Med Univ, Coll Informat & Management, Nanning 530021, Peoples R China
[6] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China
[7] Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Guangdong, Peoples R China
关键词
EMENDED DESCRIPTION; DEOXYRIBONUCLEIC-ACID; CLASSIFICATION; BACTERIA; IDENTIFICATION; MENAQUINONES;
D O I
10.1099/ijsem.0.000978
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-reaction-positive, non-motile, aerobic bacterium, designated CFH S0483(T), was isolated from a soil sample collected from Catba island in Halong Bay, Vietnam. 16S rRNA gene sequence analysis showed that the strain is a member of the genus Agromyces and has highest 16S rRNA gene sequence similarities with Agromyces humatus DSM 16389(T) (97.3 %) and Agromyces ramosus DSM 43045(T) (97.1 %), and similarities <97.0 % with type strains of other species of the genus Agromyces. Strain CFH S0483(T) was able to grow at 10-37 degrees C, at pH 7.0-9.0 and tolerated NaCl up to 2.0 % (w/v). The whole-cell sugars were mannose, galactose, glucose and ribose. The isolate contained L-2,4-diaminobutyric acid, D-alanine, D-glutamic acid and glycine in the cell-wall peptidoglycan. Strain CFH S0483(T) exhibited a menaquinone system with MK-12, and the major fatty acids were anteiso-C-15 : 0, anteiso-C-17 : 0 and iso-C-16 : 0. The genomic DNA G+C content of strain CFH S0483(T) was 71.6 mol%. Based on the phylogenetic and phenotypic analysis, and low DNA-DNA hybridization values, strain CFH S0483(T) could not be classified into any recognized species of the genus Agromyces. Strain CFH S0483(T) is therefore considered to represent a novel species of the genus Agromyces, for which the name Agromyces insulae sp. nov. is proposed. The type strain is CFH S0483(T) (=KCTC 39117(T) =CCTCC AB 2014301(T)).
引用
收藏
页码:2002 / 2007
页数:6
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