Notes, outline and divergence times of Basidiomycota

被引：430

作者：

He, Mao-Qiang ^{[1
,2
,3
]}

Zhao, Rui-Lin ^{[1
,4
]}

Hyde, Kevin D. ^{[3
]}

Begerow, Dominik ^{[5
]}

Kemler, Martin ^{[5
]}

Yurkov, Andrey ^{[6
]}

McKenzie, Eric H. C. ^{[7
]}

Raspe, Olivier ^{[8
,9
]}

Kakishima, Makoto ^{[10
]}

Sanchez-Ramirez, Santiago ^{[11
]}

Vellinga, Else C.

Halling, Roy ^{[12
]}

Papp, Viktor ^{[13
]}

Zmitrovich, Ivan, V ^{[14
]}

Buyck, Bart ^{[15
]}

Ertz, Damien ^{[8
,9
]}

Wijayawardene, Nalin N. ^{[3
]}

Cui, Bao-Kai ^{[16
]}

Schoutteten, Nathan ^{[17
]}

Liu, Xin-Zhan ^{[1
]}

Li, Tai-Hui ^{[18
]}

Yao, Yi-Jian ^{[1
]}

Zhu, Xin-Yu ^{[1
,3
]}

Liu, An-Qi ^{[1
]}

Li, Guo-Jie ^{[1
]}

Zhang, Ming-Zhe ^{[1
]}

Ling, Zhi-Lin ^{[1
]}

Cao, Bin ^{[1
]}

Antonin, Vladimir ^{[19
]}

Boekhout, Teun ^{[20
,21
]}

Barbosa da Silva, Bianca Denise ^{[22
]}

De Crop, Eske ^{[17
]}

Decock, Cony ^{[23
]}

Dima, Balint ^{[24
]}

Dutta, Arun Kumar ^{[25
]}

Fell, Jack W. ^{[26
]}

Geml, Jozsef ^{[27
]}

Ghobad-Nejhad, Masoomeh ^{[28
]}

Giachini, Admir J. ^{[29
]}

Gibertoni, Tatiana B. ^{[30
]}

Gorjon, Sergio P. ^{[31
]}

Haelewaters, Danny ^{[32
,33
]}

He, Shuang-Hui ^{[16
]}

Hodkinson, Brendan P. ^{[34
]}

Horak, Egon ^{[35
]}

Hoshino, Tamotsu ^{[36
]}

Justo, Alfredo ^{[37
]}

Lim, Young Woon ^{[38
,39
]}

Menolli Jr, Nelson ^{[40
,41
]}

Mesic, Armin ^{[42
]}

机构：

[1] Chinese Acad Sci, Inst Microbiol, State Key Lab Mycol, Beijing 100101, Peoples R China

[2] Chiang Mai Univ, Fac Agr, Dept Entomol & Plant Pathol, Chiang Mai 50200, Thailand

[3] Mae Fah Luang Univ, Ctr Excellence Fungal Res, Chiang Rai 57100, Thailand

[4] Univ Chinese Acad Sci, Coll Life Sci, Beijing 100408, Peoples R China

[5] Ruhr Univ Bochum, AG Geobot, ND03,Univ Str 150, D-44801 Bochum, Germany

[6] Leibniz Inst DSMZ German Collect Microorganisms &, Inhoffenstr 7B, D-38124 Braunschweig, Germany

[7] Manaaki Whenua Landcare Res, Private Bag 92170, Auckland, New Zealand

[8] Meise Bot Garden, Res Dept, Nieuwelaan 38, B-1860 Meise, Belgium

[9] Federat Wallonie Bruxelles, Serv Gen Enseignement Super & Rech Sci, Lavallee 1, B-1080 Brussels, Belgium

[10] Univ Tsukuba, Tsukuba, Ibaraki 3058572, Japan

[11] Univ Toronto, Dept Ecol & Evolutionary Biol, 25 Willcocks St, Toronto, ON M5S 3B2, Canada

[12] New York Bot Garden, Inst Systemat Bot, Bronx, NY 10458 USA

[13] Szent Istvan Univ, Dept Bot, H-1518 Budapest, Hungary

[14] Russian Acad Sci, Komarov Bot Inst, Prof Popov St 2, St Petersburg 197376, Russia

[15] Sorbonne Univ, Museum Natl Hist Nat, Inst Systemat Ecol Biodiversite ISYEB UMR 7205, CNRS,Dept Origins & Evolut, CP 39,12 Rue Buffon, F-75005 Paris, France

[16] Beijing Forestry Univ, Inst Microbiol, Beijing 100083, Peoples R China

[17] Univ Ghent, Dept Biol, Res Grp Mycol, KL Ledeganckstr 35, B-9000 Ghent, Belgium

[18] Guangdong Inst Microbiol, State Key Lab Appl Microbiol Southern China, Guangdong Prov Key Lab Microbial Culture Collect, Guangzhou 510070, Guangdong, Peoples R China

[19] Moravian Museum, Dept Bot, Zelny Trh 6, Brno 65937, Czech Republic

[20] Westerdijk Fungal Biodivers Inst, Utrecht, Netherlands

[21] Univ Amsterdam, IBED, Amsterdam, Netherlands

[22] Univ Fed Bahia, Inst Biol, BR-40170115 Salvador, BA, Brazil

[23] MUCL, BCCM, Croix Sud 2 Bte L5-06-07, B-1348 Louvain La Neuve, Belgium

[24] Eotvos Lorand Univ, Inst Biol, Dept Plant Anat, Pazmany Peter Setany 1-C, H-1117 Budapest, Hungary

[25] West Bengal State Univ, Dept Bot, North 24 Parganas, Barasat 700126, W Bengal, India

[26] Univ Miami, Rosenstiel Sch Marine & Atmospher Sci, 4600 Rickenbacker Causeway, Biscayne, FL 33149 USA

[27] Eszterhazy Karoly Univ, MTA EKE Lendulet Environm Microbiome Res Grp, Leanyka U 6, H-3300 Eger, Hungary

[28] Iranian Res Org Sci & Technol, Dept Biotechnol, POB 3353-5111, Tehran 3353136846, Iran

[29] Univ Fed Santa Catarina, Dept Microbiol, BR-88040900 Florianopolis, SC, Brazil

[30] Univ Fed Pernambuco, Dept Micol, Ave Engn S-N,Cidade Univ, BR-50740600 Recife, PE, Brazil

[31] Univ Salamanca, Dept Bot & Plant Physiol, C Licenciado Mendez Nieto S-N, Salamanca 37007, Spain

[32] Univ South Bohemia, Fac Sci, Branisovska 31, Ceske Budejovice 37005, Czech Republic

[33] Purdue Univ, Dept Bot & Plant Pathol, 915 W State St, W Lafayette, IN 47907 USA

[34] Univ Penn, Perelman Sch Med, BRB 1046A,421 Curie Blvd, Philadelphia, PA 19104 USA

[35] Schlossfeld 17, A-6020 Innsbruck, Austria

[36] Hachinohe Inst Technol, 88-1 Obiraki, Hachinote, Aomori 0318501, Japan

[37] Clark Univ, Dept Biol, 950 Main St, Worcester, MA 01610 USA

[38] Seoul Natl Univ, Sch Biol Sci, Seoul 08826, South Korea

[39] Seoul Natl Univ, Inst Microbiol, Seoul 08826, South Korea

[40] Inst Fed Educ Ciencia & Tecnol Sao Paulo IFSP, Dept Ciencias Nat & Matemat DCM, Subarea Biol, Campus Sao Paulo,Rua Pedro Vicente 625, BR-01109010 Sao Paulo, SP, Brazil

[41] Inst Bot, Nucleo Pesquisa Micol, Av Miguel Stefano 3687, BR-04301012 Sao Paulo, SP, Brazil

[42] Rudjer Boskovic Inst, Bijenicka Cesta 54, Zagreb 10000, Croatia

[43] Royal Ontario Museum, Dept Nat Hist, Toronto, ON M5S 2C6, Canada

[44] Univ Toronto, Dept Ecol & Evolutionary Biol, Toronto, ON M5S 2C6, Canada

[45] Chicago Bot Garden, 1000 Lake Cook Rd, Glencoe, IL 60022 USA

[46] Has, Synthet & Syst Biol Unit, Biol Res Ctr, H-6726 Szeged, Hungary

[47] Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Gothenburg, Sweden

[48] Naturalis Biodivers Ctr, POB 9517, NL-2300 RA Leiden, Netherlands

[49] Kanagawa Prefectural Museum Nat Hist, 499 Iryuda, Odawara, Kanagawa 2500031, Japan

[50] Ctr Forestal CIEFAP, Protecc Forestal, CC 14, RA-9200 Esquel, Chubut, Argentina

来源：

FUNGAL DIVERSITY | 2019年 / 99卷 / 01期

基金：

中国国家自然科学基金; 国家重点研发计划;

关键词：

Classification; Molecular clock; Fungi; Systematics; Taxonomy; SP-NOV BASIDIOMYCOTA; WHITE-ROT FUNGUS; NEW-SOUTH-WALES; WOOD-INHABITING FUNGI; ATLANTIC RAIN-FOREST; MARASMIUS SECTION GLOBULARES; GENUS ENTOLOMA BASIDIOMYCOTA; INTERNAL TRANSCRIBED SPACER; MUSHROOM-FORMING FUNGI; WILD EDIBLE MUSHROOM;

D O I：

10.1007/s13225-019-00435-4

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406-430 Mya, classes are 211-383 Mya, and orders are 99-323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27-178 Mya, Pucciniomycotina from 85-222 Mya, and Ustilaginomycotina from 79-177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of theirphylogeny and evolution.

引用

页码：105 / 367

页数：263

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